Macromolecule Annotations for the Entities in PDB 1Q0D

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1q0da_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
B d1q0db_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
C d1q0dc_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
D d1q0dd_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
E d1q0de_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
F d1q0df_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
G d1q0dg_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
H d1q0dh_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
I d1q0di_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
J d1q0dj_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
K d1q0dk_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]
L d1q0dl_ All alpha proteins Four-helical up-and-down bundle Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Nickel-containing superoxide dismutase, NiSOD Streptomyces seoulensis [TaxId: 73044]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A 1q0dA00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
B 1q0dB00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
C 1q0dC00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
D 1q0dD00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
E 1q0dE00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
F 1q0dF00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
G 1q0dG00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
H 1q0dH00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
I 1q0dI00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
J 1q0dJ00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
K 1q0dK00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD
L 1q0dL00 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nickel-containing superoxide dismutase, NiSOD

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF09055 Sod_Ni Nickel-containing superoxide dismutase Domain Nickel containing superoxide dismutase (NiSOD) is a metalloenzyme containing a hexameric assembly of right-handed 4-helix bundles of up-down-up-down topology with an N-terminal His-Cys-X-X-Pro-Cys-Gly-X-Tyr motif that chelates the active site Ni ions. NiSOD catalyses the disproportionation of superoxide to peroxide and molecular oxygen through alternate oxidation and reduction of Ni, protecting cells from the toxic products of aerobic metabolism [1]. PFAM PF09055

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D,E,F,G,H,I,J,K,L Superoxide dismutase [Ni] (1Q0D:A,B,C,D,E,F,G,H,I,J,K,L)
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description