Macromolecule Annotations for the Entities in PDB 1PVO

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-47 d1pvoa1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
A48-126 d1pvoa2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
A129-417 d1pvoa3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
B51-126 d1pvob1 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
B129-417 d1pvob2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
C1-47 d1pvoc1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
C48-126 d1pvoc2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
C129-417 d1pvoc3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
D1-47 d1pvod1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
D48-126 d1pvod2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
D129-417 d1pvod3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
E1-47 d1pvoe1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
E48-126 d1pvoe2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
E129-417 d1pvoe3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
F1-47 d1pvof1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
F48-126 d1pvof2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
F129-417 d1pvof3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF07497 Rho_RNA_bind Rho termination factor, RNA-binding domain Domain The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers [1]. PFAM PF07497
A PF07498 Rho_N Rho termination factor, N-terminal domain Family
A PF00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain Family

Gene Product Annotation Gene Ontology Consortium Homepage

Protein Modification Annotation

Type PDB Residue Nr. Description