Macromolecule Annotations for the Entities in PDB 1PV4

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-47 d1pv4a1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
A48-126 d1pv4a2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
A129-417 d1pv4a3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
B51-126 d1pv4b1 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
B129-417 d1pv4b2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
C1-47 d1pv4c1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
C48-126 d1pv4c2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
C129-417 d1pv4c3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
D1-47 d1pv4d1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
D48-126 d1pv4d2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
D129-417 d1pv4d3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
E1-47 d1pv4e1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
E48-126 d1pv4e2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
E129-417 d1pv4e3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]
F1-47 d1pv4f1 All alpha proteins LEM/SAP HeH motif Rho N-terminal domain-like Rho termination factor, N-terminal domain Rho termination factor, N-terminal domain Escherichia coli [TaxId: 562]
F48-126 d1pv4f2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Rho termination factor, RNA-binding domain Escherichia coli [TaxId: 562]
F129-417 d1pv4f3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Transcription termination factor Rho, ATPase domain Escherichia coli [TaxId: 562]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF07497 Rho_RNA_bind Rho termination factor, RNA-binding domain Domain The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers [1]. PFAM PF07497
A PF07498 Rho_N Rho termination factor, N-terminal domain Family
A PF00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain Family

Gene Product Annotation Gene Ontology Consortium Homepage

Protein Modification Annotation

Type PDB Residue Nr. Description