Macromolecule Annotations for the Entities in PDB 1PTO

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
B90-199 d1ptob1 All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S2/S3 subunits, C-terminal domain Bordetella pertussis [TaxId: 520]
C90-199 d1ptoc1 All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S2/S3 subunits, C-terminal domain Bordetella pertussis [TaxId: 520]
H90-199 d1ptoh1 All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S2/S3 subunits, C-terminal domain Bordetella pertussis [TaxId: 520]
I90-199 d1ptoi1 All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S2/S3 subunits, C-terminal domain Bordetella pertussis [TaxId: 520]
D d1ptod_ All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S4 subunit Bordetella pertussis [TaxId: 520]
E d1ptoe_ All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S4 subunit Bordetella pertussis [TaxId: 520]
J d1ptoj_ All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S4 subunit Bordetella pertussis [TaxId: 520]
K d1ptok_ All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S4 subunit Bordetella pertussis [TaxId: 520]
F d1ptof_ All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S5 subunit Bordetella pertussis [TaxId: 520]
L d1ptol_ All beta proteins OB-fold Bacterial enterotoxins Bacterial AB5 toxins, B-subunits Pertussis toxin S5 subunit Bordetella pertussis [TaxId: 520]
A d1ptoa_ Alpha and beta proteins (a+b) ADP-ribosylation ADP-ribosylation ADP-ribosylating toxins Pertussis toxin, S1 subunit Bordetella pertussis [TaxId: 520]
G d1ptog_ Alpha and beta proteins (a+b) ADP-ribosylation ADP-ribosylation ADP-ribosylating toxins Pertussis toxin, S1 subunit Bordetella pertussis [TaxId: 520]
B4-89 d1ptob2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Aerolysin/Pertussis toxin (APT) domain Pertussis toxin, S2/S3 subunits, N-terminal domain Bordetella pertussis [TaxId: 520]
C4-89 d1ptoc2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Aerolysin/Pertussis toxin (APT) domain Pertussis toxin, S2/S3 subunits, N-terminal domain Bordetella pertussis [TaxId: 520]
H2-89 d1ptoh2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Aerolysin/Pertussis toxin (APT) domain Pertussis toxin, S2/S3 subunits, N-terminal domain Bordetella pertussis [TaxId: 520]
I4-89 d1ptoi2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Aerolysin/Pertussis toxin (APT) domain Pertussis toxin, S2/S3 subunits, N-terminal domain Bordetella pertussis [TaxId: 520]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A 1ptoA00 Alpha Beta Alpha-Beta Complex Heat-Labile Enterotoxin; Chain A Heat-Labile Enterotoxin, subunit A
B1 1ptoB01 Alpha Beta Roll Pertussis Toxin; Chain B, domain 1 Pertussis Toxin, subunit B, domain 1
B2 1ptoB02 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
C1 1ptoC01 Alpha Beta Roll Pertussis Toxin; Chain B, domain 1 Pertussis Toxin, subunit B, domain 1
C2 1ptoC02 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
D 1ptoD00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
E 1ptoE00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
F 1ptoF00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
G 1ptoG00 Alpha Beta Alpha-Beta Complex Heat-Labile Enterotoxin; Chain A Heat-Labile Enterotoxin, subunit A
H1 1ptoH01 Alpha Beta Roll Pertussis Toxin; Chain B, domain 1 Pertussis Toxin, subunit B, domain 1
H2 1ptoH02 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
I1 1ptoI01 Alpha Beta Roll Pertussis Toxin; Chain B, domain 1 Pertussis Toxin, subunit B, domain 1
I2 1ptoI02 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
J 1ptoJ00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
K 1ptoK00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)
L 1ptoL00 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P)

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF02917 Pertussis_S1 Pertussis toxin, subunit 1 Domain PFAM PF02917
H PF03440 APT Aerolysin/Pertussis toxin (APT) domain Domain This family represents the N-terminal domain of aerolysin and pertussis toxin and has a type-C lectin like fold. PFAM PF03440
D PF09275 Pertus-S4-tox Pertussis toxin S4 subunit Domain Members of this family of Bordetella pertussis toxins adopt a structure consisting of an OB fold, with a closed or partly opened beta-barrel in a Greek-key topology [1]. PFAM PF09275
C PF02918 Pertussis_S2S3 Pertussis toxin, subunit 2 and 3, C-terminal domain Domain PFAM PF02918
F PF09276 Pertus-S5-tox Pertussis toxin S5 subunit Domain Members of this family of Bordetella pertussis toxins adopt a structure consisting of an OB fold, with a closed or partly opened beta-barrel in a Greek-key topology [1]. PFAM PF09276
H PF02918 Pertussis_S2S3 Pertussis toxin, subunit 2 and 3, C-terminal domain Domain PFAM PF02918
C PF03440 APT Aerolysin/Pertussis toxin (APT) domain Domain This family represents the N-terminal domain of aerolysin and pertussis toxin and has a type-C lectin like fold. PFAM PF03440
B PF02918 Pertussis_S2S3 Pertussis toxin, subunit 2 and 3, C-terminal domain Domain PFAM PF02918
B PF03440 APT Aerolysin/Pertussis toxin (APT) domain Domain This family represents the N-terminal domain of aerolysin and pertussis toxin and has a type-C lectin like fold. PFAM PF03440

Gene Product Annotation Gene Ontology Consortium Homepage

Protein Modification Annotation

Type PDB Residue Nr. Description