Macromolecule Annotations for the Entities in PDB 1PMA

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
B d1pmab_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
P d1pmap_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
Q d1pmaq_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
R d1pmar_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
S d1pmas_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
T d1pmat_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
U d1pmau_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
V d1pmav_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
W d1pmaw_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
X d1pmax_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
Y d1pmay_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
Z d1pmaz_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
1 d1pma1_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
2 d1pma2_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
A d1pmaa_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
C d1pmac_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
D d1pmad_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
E d1pmae_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
F d1pmaf_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
G d1pmag_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
H d1pmah_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
I d1pmai_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
J d1pmaj_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
K d1pmak_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
L d1pmal_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
M d1pmam_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
N d1pman_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]
O d1pmao_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome alpha subunit (non-catalytic) Archaeon Thermoplasma acidophilum [TaxId: 2303]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
1 1pma100 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
2 1pma200 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
A 1pmaA00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
B 1pmaB00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
C 1pmaC00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
D 1pmaD00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
E 1pmaE00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
F 1pmaF00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
G 1pmaG00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
H 1pmaH00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
I 1pmaI00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
J 1pmaJ00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
K 1pmaK00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
L 1pmaL00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
M 1pmaM00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
N 1pmaN00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
O 1pmaO00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
P 1pmaP00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Q 1pmaQ00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
R 1pmaR00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
S 1pmaS00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
T 1pmaT00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
U 1pmaU00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
V 1pmaV00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
W 1pmaW00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
X 1pmaX00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Y 1pmaY00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Z 1pmaZ00 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00227 Proteasome Proteasome subunit Domain The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1]. PFAM PF00227
A PF10584 Proteasome_A_N Proteasome subunit A N-terminal signature Domain This domain is conserved in the A subunits of the proteasome complex proteins. PFAM PF10584
1 PF00227 Proteasome Proteasome subunit Domain The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1]. PFAM PF00227

Protein Modification Annotation

Type PDB Residue Nr. Description