Macromolecule Annotations for the Entities in PDB 1PK8

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A112-213 d1pk8a1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Synapsin domain Synapsin I Rat (Rattus norvegicus) [TaxId: 10116]
A214-417 d1pk8a2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Synapsin C-terminal domain Synapsin Rat (Rattus norvegicus) [TaxId: 10116]
B113-213 d1pk8b1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Synapsin domain Synapsin I Rat (Rattus norvegicus) [TaxId: 10116]
B214-417 d1pk8b2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Synapsin C-terminal domain Synapsin Rat (Rattus norvegicus) [TaxId: 10116]
C113-213 d1pk8c1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Synapsin domain Synapsin I Rat (Rattus norvegicus) [TaxId: 10116]
C214-417 d1pk8c2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Synapsin C-terminal domain Synapsin Rat (Rattus norvegicus) [TaxId: 10116]
D112-213 d1pk8d1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Synapsin domain Synapsin I Rat (Rattus norvegicus) [TaxId: 10116]
D214-417 d1pk8d2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Synapsin C-terminal domain Synapsin Rat (Rattus norvegicus) [TaxId: 10116]
E112-213 d1pk8e1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Synapsin domain Synapsin I Rat (Rattus norvegicus) [TaxId: 10116]
E214-416 d1pk8e2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Synapsin C-terminal domain Synapsin Rat (Rattus norvegicus) [TaxId: 10116]
F113-213 d1pk8f1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Synapsin domain Synapsin I Rat (Rattus norvegicus) [TaxId: 10116]
F214-417 d1pk8f2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Synapsin C-terminal domain Synapsin Rat (Rattus norvegicus) [TaxId: 10116]
G112-213 d1pk8g1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Synapsin domain Synapsin I Rat (Rattus norvegicus) [TaxId: 10116]
G214-417 d1pk8g2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Synapsin C-terminal domain Synapsin Rat (Rattus norvegicus) [TaxId: 10116]
H112-213 d1pk8h1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Synapsin domain Synapsin I Rat (Rattus norvegicus) [TaxId: 10116]
H214-417 d1pk8h2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like Synapsin C-terminal domain Synapsin Rat (Rattus norvegicus) [TaxId: 10116]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1pk8A01 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
A2 1pk8A02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
A3 1pk8A03 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
B1 1pk8B01 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
B2 1pk8B02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
B3 1pk8B03 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
C1 1pk8C01 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
C2 1pk8C02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
C3 1pk8C03 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
D1 1pk8D01 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
D2 1pk8D02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
D3 1pk8D03 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
E1 1pk8E01 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
E2 1pk8E02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
E3 1pk8E03 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
F1 1pk8F01 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
F2 1pk8F02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
F3 1pk8F03 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
G1 1pk8G01 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
G2 1pk8G02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
G3 1pk8G03 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
H1 1pk8H01 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
H2 1pk8H02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
H3 1pk8H03 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D,E,F,G,H rat synapsin I (1PK8:A,B,C,D,E,F,G,H)

Protein Modification Annotation

Type PDB Residue Nr. Description