Macromolecule Annotations for the Entities in PDB 1PFX

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
L PF00008 EGF EGF-like domain Domain There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains. PFAM PF00008
L PF14670 FXa_inhibition Coagulation Factor Xa inhibitory site Domain This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442 [1]. PFAM PF14670
C PF00089 Trypsin Trypsin Domain PFAM PF00089
L PF00594 Gla Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain Domain This domain is responsible for the high-affinity binding of calcium ions. This domain contains post-translational modifications of many glutamate residues by Vitamin K-dependent carboxylation to form gamma-carboxyglutamate (Gla). PFAM PF00594

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
C FACTOR IXA (1PFX:C)
  • none
L FACTOR IXA (1PFX:L)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description