Macromolecule Annotations for the Entities in PDB 1PF9

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A2-136,A410-525 d1pf9a1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
A191-366 d1pf9a2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
A137-190,A367-409 d1pf9a3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
B2-136,B410-525 d1pf9b1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
B191-366 d1pf9b2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
B137-190,B367-409 d1pf9b3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
C2-136,C410-525 d1pf9c1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
C191-366 d1pf9c2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
C137-190,C367-409 d1pf9c3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
D2-136,D410-525 d1pf9d1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
D191-366 d1pf9d2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
D137-190,D367-409 d1pf9d3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
E2-136,E410-525 d1pf9e1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
E191-366 d1pf9e2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
E137-190,E367-409 d1pf9e3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
F2-136,F410-525 d1pf9f1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
F191-366 d1pf9f2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
F137-190,F367-409 d1pf9f3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
G2-136,G410-525 d1pf9g1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
G191-366 d1pf9g2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
G137-190,G367-409 d1pf9g3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
H2-136,H410-525 d1pf9h1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
H191-366 d1pf9h2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
H137-190,H367-409 d1pf9h3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
I2-136,I410-525 d1pf9i1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
I191-366 d1pf9i2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
I137-190,I367-409 d1pf9i3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
J2-136,J410-525 d1pf9j1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
J191-366 d1pf9j2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
J137-190,J367-409 d1pf9j3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
K2-136,K410-525 d1pf9k1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
K191-366 d1pf9k2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
K137-190,K367-409 d1pf9k3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
L2-136,L410-525 d1pf9l1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
L191-366 d1pf9l2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
L137-190,L367-409 d1pf9l3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
M2-136,M410-525 d1pf9m1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
M191-366 d1pf9m2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
M137-190,M367-409 d1pf9m3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
N2-136,N410-525 d1pf9n1 All alpha proteins GroEL equatorial domain-like GroEL equatorial domain-like GroEL chaperone, ATPase domain GroEL, E domain Escherichia coli [TaxId: 562]
N191-366 d1pf9n2 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain GroEL apical domain-like GroEL-like chaperone, apical domain GroEL, A domain Escherichia coli [TaxId: 562]
N137-190,N367-409 d1pf9n3 Alpha and beta proteins (a+b) GroEL-intermediate domain like GroEL-intermediate domain like GroEL-like chaperone, intermediate domain GroEL, I domain Escherichia coli [TaxId: 562]
O d1pf9o_ All beta proteins GroES-like GroES-like GroES Chaperonin-10 (GroES) Escherichia coli [TaxId: 562]
P d1pf9p_ All beta proteins GroES-like GroES-like GroES Chaperonin-10 (GroES) Escherichia coli [TaxId: 562]
Q d1pf9q_ All beta proteins GroES-like GroES-like GroES Chaperonin-10 (GroES) Escherichia coli [TaxId: 562]
R d1pf9r_ All beta proteins GroES-like GroES-like GroES Chaperonin-10 (GroES) Escherichia coli [TaxId: 562]
S d1pf9s_ All beta proteins GroES-like GroES-like GroES Chaperonin-10 (GroES) Escherichia coli [TaxId: 562]
T d1pf9t_ All beta proteins GroES-like GroES-like GroES Chaperonin-10 (GroES) Escherichia coli [TaxId: 562]
U d1pf9u_ All beta proteins GroES-like GroES-like GroES Chaperonin-10 (GroES) Escherichia coli [TaxId: 562]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1pf9A01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
A2 1pf9A02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
A3 1pf9A03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
B1 1pf9B01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
B2 1pf9B02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
B3 1pf9B03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
C1 1pf9C01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
C2 1pf9C02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
C3 1pf9C03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
D1 1pf9D01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
D2 1pf9D02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
D3 1pf9D03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
E1 1pf9E01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
E2 1pf9E02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
E3 1pf9E03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
F1 1pf9F01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
F2 1pf9F02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
F3 1pf9F03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
G1 1pf9G01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
G2 1pf9G02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
G3 1pf9G03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
H1 1pf9H01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
H2 1pf9H02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
H3 1pf9H03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
I1 1pf9I01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
I2 1pf9I02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
I3 1pf9I03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
J1 1pf9J01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
J2 1pf9J02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
J3 1pf9J03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
K1 1pf9K01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
K2 1pf9K02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
K3 1pf9K03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
L1 1pf9L01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
L2 1pf9L02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
L3 1pf9L03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
M1 1pf9M01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
M2 1pf9M02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
M3 1pf9M03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
N1 1pf9N01 Mainly Alpha Orthogonal Bundle GROEL; domain 1 GROEL, domain 1
N2 1pf9N02 Alpha Beta 2-Layer Sandwich GROEL; domain 2 GROEL, domain 2
N3 1pf9N03 Alpha Beta 3-Layer(bba) Sandwich GroEL GroEL
O 1pf9O00 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10; Chain O 10 Kd Chaperonin, Protein Cpn10; Chain O
P 1pf9P00 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10; Chain O 10 Kd Chaperonin, Protein Cpn10; Chain O
Q 1pf9Q00 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10; Chain O 10 Kd Chaperonin, Protein Cpn10; Chain O
R 1pf9R00 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10; Chain O 10 Kd Chaperonin, Protein Cpn10; Chain O
S 1pf9S00 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10; Chain O 10 Kd Chaperonin, Protein Cpn10; Chain O
T 1pf9T00 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10; Chain O 10 Kd Chaperonin, Protein Cpn10; Chain O
U 1pf9U00 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10; Chain O 10 Kd Chaperonin, Protein Cpn10; Chain O

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00118 Cpn60_TCP1 TCP-1/cpn60 chaperonin family Family
O PF00166 Cpn10 Chaperonin 10 Kd subunit Domain This family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis [1]. PFAM PF00166