Warning
You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.
MyPDB
Toggle navigation
RCSB PDB
Deposit
Prepare Data
pdb_extract
SF-Tool
Ligand Expo
MAXIT
Validate Data
Validation Server
Information for Journals
Validation Task Forces
Deposit Data
wwPDB OneDep System
Deposition Help & Resources
Deposit FAQ
Tutorials
Annotation Policies
Processing Procedures
PDBx/mmCIF Dictionary
Chemical Component Dictionary
PDB Format Guide
BioSync Beamlines/Facilities
Related Tools
Search
Advanced Search
Drilldown Search
Unreleased & New Entries
Sequences
Ligands
Drugs & Drug Targets
Browse by Annotation
PDB Statistics
Visualize
Visualize3DViewer
PoseView
Protein Feature View
Human Gene View
Pathway View
Analyze
Sequence & Structure Alignment
Protein Symmetry
Structure Quality
Map Genomic Position to Protein
PDB Statistics
Third Party Tools
Download
Coordinates & Experimental Data
Sequences
Ligands
FTP Archive & Services
HTTPS Services
Other Services
RESTful Web Services
Learn
About
Molecule of the Month
Browse all Resources
Educational Resources
Curricula
Guide to PDB Data
News and Events
More
Contact Us
Citing Us
Usage & Privacy
Help Topics
About RCSB PDB
Team Members
Advisory Committee
News
Publications
Careers
139717
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
Go
Advanced
Search
|
Browse
by Annotations
|
Search
History
|
Previous
Results
Navigation Tabs
Structure Summary
3D View
Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1P4L
Crystal structure of NK receptor Ly49C mutant with its MHC class I ligand H-2Kb
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
Download Files
FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Structure Factor (Text)
Structure Factor (gz)
Biological Assembly (gz) (A)
Macromolecule Annotations for the Entities in PDB 1P4L
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A182-274
d1p4la1
All beta proteins
Immunoglobulin-like beta-sandwich
Immunoglobulin
C1 set domains (antibody constant domain- like)
Class I MHC, alpha-3 domain
Mouse (Mus musculus) [TaxId: 10090]
A2-181
d1p4la2
Alpha and beta proteins (a+b)
MHC antigen-recognition domain
MHC antigen-recognition domain
MHC antigen-recognition domain
Class I MHC, alpha-1 and alpha-2 domains
Mouse (Mus musculus), H-2KB [TaxId: 10090]
B
d1p4lb_
All beta proteins
Immunoglobulin-like beta-sandwich
Immunoglobulin
C1 set domains (antibody constant domain- like)
beta2-microglobulin
Mouse (Mus musculus) [TaxId: 10090]
D
d1p4ld_
Alpha and beta proteins (a+b)
C-type lectin-like
C-type lectin-like
C-type lectin domain
NK cell receptor
Mouse (Mus musculus), ly49-c [TaxId: 10090]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1p4lA01
Alpha Beta
2-Layer Sandwich
Murine Class I Major Histocompatibility Complex, H2- DB; Chain A, domain 1
Murine Class I Major Histocompatibility Complex, H2- DB, subunit A, domain 1
A2
1p4lA02
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
B
1p4lB00
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
D
1p4lD00
Alpha Beta
Roll
Mannose-Binding Protein A; Chain A
Mannose-Binding Protein A, subunit A
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
MHC CLASS I H-2KB HEAVY CHAIN (1P4L:A)
none
none
none
B
Beta-2-microglobulin (1P4L:B)
Protein Binding
Identical Protein Binding
Positive Regulation of T Cell Mediated Cytotoxicity
Response to Molecule of Bacterial Origin
Immune System Process
Antigen Processing and Presentation of Peptide Antigen Via Mhc Class I
Antigen Processing and Presentation of Exogenous Protein Antigen Via Mhc Class Ib Tap Dependent
Positive Regulation of T Cell Cytokine Production
Iron Ion Transport
Immune Response
Cellular Defense Response
Negative Regulation of Neuron Projection Development
Antigen Processing and Presentation of Endogenous Peptide Antigen Via Mhc Class I
Positive Regulation of Protein Binding
T Cell Differentiation in Thymus
Ferric Iron Import
Protein Refolding
Response to Drug
Regulation of Erythrocyte Differentiation
Response to Cadmium Ion
Positive Regulation of Receptor Mediated Endocytosis
Iron Ion Homeostasis
Cellular Response to Iron Ion
Cellular Response to Iron(iii) Ion
Negative Regulation of Receptor Binding
Positive Regulation of Receptor Binding
Regulation of Iron Ion Import
Positive Regulation of Ferrous Iron Binding
Positive Regulation of Transferrin Receptor Binding
Extracellular Region
Extracellular Space
Golgi Apparatus
Cytosol
Plasma Membrane
External Side of Plasma Membrane
Phagocytic Vesicle Membrane
Mhc Class I Protein Complex
Hfe Transferrin Receptor Complex
P
Ovalbumin peptide (1P4L:P)
none
none
none
D
LY49-C (1P4L:D)
none
none
none
Protein Modification Annotation
Type
PDB Residue Nr.
Description