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139555
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
3D View
Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1OXJ
Crystal structure of the Smaug RNA binding domain
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
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FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Biological Assembly (gz) (A)
Macromolecule Annotations for the Entities in PDB 1OXJ
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A594-655
d1oxja1
All alpha proteins
SAM domain-like
SAM/Pointed domain
SAM (sterile alpha motif) domain
RNA-binding protein Smaug
Drosophila melanogaster [TaxId: 7227]
A656-763
d1oxja2
All alpha proteins
alpha-alpha superhelix
ARM repeat
PHAT domain
RNA-binding protein Smaug
Drosophila melanogaster [TaxId: 7227]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1oxjA01
Mainly Alpha
Orthogonal Bundle
DNA polymerase; domain 1
Transcription Factor, Ets-1
A2
1oxjA02
Mainly Alpha
Alpha Horseshoe
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
RNA-binding protein Smaug (1OXJ:A)
RNA Binding
Translation Repressor Activity
Regulation of Transcription DNA Templated
Negative Regulation of Translation
Regulation of MRNA Stability
none
Protein Modification Annotation
Type
PDB Residue Nr.
Description