Macromolecule Annotations for the Entities in PDB 1OTN

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF12799 LRR_4 Leucine Rich repeats (2 copies) Family
A PF13855 LRR_8 Leucine rich repeat Repeat
A PF12354 Internalin_N Bacterial adhesion/invasion protein N terminal Domain This domain family is found in bacteria, and is approximately 60 amino acids in length. The family is found in association with Pfam:PF00560, Pfam:PF08191, Pfam:PF09479. There are two completely conserved residues (I and F) that may be functionally important. Internalin mediates bacterial adhesion and invasion of epithelial cells in the human intestine through specific interaction with its host cell receptor E-cadherin. This family is the N terminal of internalin, the cap domain of the protein. The cap domain is conserved between different internalin types. The cap domain does not interact with E cadherin, therefore its function is presumably structural: capping the hydrophobic core. PFAM PF12354

Protein Modification Annotation

Type PDB Residue Nr. Description