RCSB Protein Data Bank

doi:10.2210/pdb1o1j/pdb

141415 Biological Macromolecular Structures Enabling Breakthroughs in Research and Education

1O1J

Deoxy hemoglobin (A-GLY-C:V1M,L29F,H58Q; B,D:V1M,L106W)

Macromolecule Annotations for the Entities in PDB 1O1J

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species
A1-142	d1o1ja1	All alpha proteins	Globin-like	Globin-like	Globins	Hemoglobin, alpha-chain	Human (Homo sapiens) [TaxId: 9606]
A143-283	d1o1ja2	All alpha proteins	Globin-like	Globin-like	Globins	Hemoglobin, alpha-chain	Human (Homo sapiens) [TaxId: 9606]
B	d1o1jb_	All alpha proteins	Globin-like	Globin-like	Globins	Hemoglobin, beta-chain	Human (Homo sapiens) [TaxId: 9606]
D	d1o1jd_	All alpha proteins	Globin-like	Globin-like	Globins	Hemoglobin, beta-chain	Human (Homo sapiens) [TaxId: 9606]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains	Domain	Class	Architecture	Topology	Homology
A1	1o1jA01	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins
A2	1o1jA02	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins
B	1o1jB00	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins
D	1o1jD00	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins

Protein Family Annotation Pfam Database Homepage

Chains	Pfam Accession	Pfam Identifier	Pfam Description	Type	Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Hemoglobin Alpha chain (1O1J:A)	Peroxidase Activity Oxygen Carrier Activity Iron Ion Binding Protein Binding Oxygen Binding Heme Binding Haptoglobin Binding Metal Ion Binding	Receptor Mediated Endocytosis Positive Regulation of Cell Death Oxygen Transport Bicarbonate Transport Response to Hydrogen Peroxide Hydrogen Peroxide Catabolic Process Protein Heterooligomerization Cellular Oxidant Detoxification	Extracellular Region Extracellular Space Cytosol Hemoglobin Complex Membrane Cytosolic Small Ribosomal Subunit Haptoglobin Hemoglobin Complex Extracellular Exosome Endocytic Vesicle Lumen Blood Microparticle
B,D	Hemoglobin Beta chain (1O1J:B,D)	Peroxidase Activity Oxygen Carrier Activity Protein Binding Oxygen Binding Heme Binding Hemoglobin Binding Haptoglobin Binding Metal Ion Binding	Receptor Mediated Endocytosis Blood Coagulation Regulation of Blood Pressure Positive Regulation of Cell Death Oxygen Transport Bicarbonate Transport Nitric Oxide Transport Response to Hydrogen Peroxide Hydrogen Peroxide Catabolic Process Neutrophil Degranulation Positive Regulation of Nitric Oxide Biosynthetic Process Regulation of Blood Vessel Size Protein Heterooligomerization Renal Absorption Platelet Aggregation Cellular Oxidant Detoxification	Extracellular Region Extracellular Space Cytosol Hemoglobin Complex Haptoglobin Hemoglobin Complex Extracellular Exosome Endocytic Vesicle Lumen Blood Microparticle Tertiary Granule Lumen Ficolin 1 Rich Granule Lumen

Protein Modification Annotation

Type	PDB Residue Nr.	Description

The RCSB PDB is funded by a grant (DBI-1338415) from the National Science Foundation, the National Institutes of Health, and the US Department of Energy.

Prepare Data

Validate Data

Deposit Data

Deposition Help & Resources

141415 Biological Macromolecular Structures Enabling Breakthroughs in Research and Education

1O1J

Deoxy hemoglobin (A-GLY-C:V1M,L29F,H58Q; B,D:V1M,L106W)

Macromolecule Annotations for the Entities in PDB 1O1J

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Protein Family Annotation Pfam Database Homepage

Gene Product Annotation Gene Ontology Consortium Homepage

Protein Modification Annotation