Macromolecule Annotations for the Entities in PDB 1NY6

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1ny6a_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
B d1ny6b_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
C d1ny6c_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
D d1ny6d_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
E d1ny6e_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
F d1ny6f_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
G d1ny6g_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
H d1ny6h_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
I d1ny6i_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
J d1ny6j_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
K d1ny6k_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
L d1ny6l_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
M d1ny6m_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]
N d1ny6n_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain Transcriptional activator sigm54 (NtrC1), C- terminal domain Aquifex aeolicus [TaxId: 63363]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1ny6A01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
A2 1ny6A02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
B1 1ny6B01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
B2 1ny6B02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
C1 1ny6C01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
C2 1ny6C02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
D1 1ny6D01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
D2 1ny6D02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
E1 1ny6E01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
E2 1ny6E02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
F1 1ny6F01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
F2 1ny6F02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
G1 1ny6G01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
G2 1ny6G02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
H1 1ny6H01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
H2 1ny6H02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
I1 1ny6I01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
I2 1ny6I02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
J1 1ny6J01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
J2 1ny6J02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
K1 1ny6K01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
K2 1ny6K02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
L1 1ny6L01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
L2 1ny6L02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
M1 1ny6M01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
M2 1ny6M02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3
N1 1ny6N01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
N2 1ny6N02 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein; domain 3

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00158 Sigma54_activat Sigma-54 interaction domain Domain PFAM PF00158

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D,E,F,G,H,I,J,K,L,M,N transcriptional regulator (NtrC family) (1NY6:A,B,C,D,E,F,G,H,I,J,K,L,M,N)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description