Macromolecule Annotations for the Entities in PDB 1NL1

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A 1nl1A00 Mainly Beta Beta Barrel Plasminogen Kringle 4 Plasminogen Kringle 4

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00594 Gla Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain Domain This domain is responsible for the high-affinity binding of calcium ions. This domain contains post-translational modifications of many glutamate residues by Vitamin K-dependent carboxylation to form gamma-carboxyglutamate (Gla). PFAM PF00594
A PF00051 Kringle Kringle domain Domain Kringle domains have been found in plasminogen, hepatocyte growth factors, prothrombin, and apolipoprotein A. Structure is disulfide-rich, nearly all-beta. PFAM PF00051

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A Prothrombin (1NL1:A)
SUGAR (2-MER) (1NL1:)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description