Macromolecule Annotations for the Entities in PDB 1NGM

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A61-155 d1ngma1 Alpha and beta proteins (a+b) TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain TATA-box binding protein (TBP), C-terminal domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
A156-240 d1ngma2 Alpha and beta proteins (a+b) TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain TATA-box binding protein (TBP), C-terminal domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
B d1ngmb_ Peptides TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
E61-155 d1ngme1 Alpha and beta proteins (a+b) TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain TATA-box binding protein (TBP), C-terminal domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
E156-240 d1ngme2 Alpha and beta proteins (a+b) TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain TATA-box binding protein (TBP), C-terminal domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
F d1ngmf_ Peptides TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
I61-155 d1ngmi1 Alpha and beta proteins (a+b) TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain TATA-box binding protein (TBP), C-terminal domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
I156-240 d1ngmi2 Alpha and beta proteins (a+b) TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain TATA-box binding protein (TBP), C-terminal domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
J d1ngmj_ Peptides TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
M61-155 d1ngmm1 Alpha and beta proteins (a+b) TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain TATA-box binding protein (TBP), C-terminal domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
M156-240 d1ngmm2 Alpha and beta proteins (a+b) TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain TATA-box binding protein (TBP), C-terminal domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
N d1ngmn_ Peptides TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit TBP-binding domain of the transcription factor IIIb Brf1 subunit Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
C,G,K,O 5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)- 3' (1NGM:C,G,K,O)
  • none
  • none
  • none
D,H,L,P 5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)- 3' (1NGM:D,H,L,P)
  • none
  • none
  • none
A,E,I,M Transcription initiation factor TFIID (1NGM:A,E,I,M)
  • none
B,F,J,N Transcription factor IIIB BRF1 subunit (1NGM:B,F,J,N)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description