Macromolecule Annotations for the Entities in PDB 1NFI

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
E d1nfie_ Alpha and beta proteins (a+b) beta-hairpin-alpha-hairpin repeat Ankyrin repeat Ankyrin repeat I-kappa-B-alpha Human (Homo sapiens) [TaxId: 9606]
F d1nfif_ Alpha and beta proteins (a+b) beta-hairpin-alpha-hairpin repeat Ankyrin repeat Ankyrin repeat I-kappa-B-alpha Human (Homo sapiens) [TaxId: 9606]
B d1nfib_ All beta proteins Immunoglobulin-like beta-sandwich E set domains NF-kappa-B/REL/DORSAL transcription factors, C- terminal domain p50 subunit of NF-kappa B transcription factor Human (Homo sapiens) [TaxId: 9606]
D d1nfid_ All beta proteins Immunoglobulin-like beta-sandwich E set domains NF-kappa-B/REL/DORSAL transcription factors, C- terminal domain p50 subunit of NF-kappa B transcription factor Human (Homo sapiens) [TaxId: 9606]
A190-314 d1nfia1 All beta proteins Immunoglobulin-like beta-sandwich E set domains NF-kappa-B/REL/DORSAL transcription factors, C- terminal domain p65 subunit of NF-kappa B (NFKB), dimerization domain Human (Homo sapiens) [TaxId: 9606]
C190-320 d1nfic1 All beta proteins Immunoglobulin-like beta-sandwich E set domains NF-kappa-B/REL/DORSAL transcription factors, C- terminal domain p65 subunit of NF-kappa B (NFKB), dimerization domain Human (Homo sapiens) [TaxId: 9606]
A20-189 d1nfia2 All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f p53-like transcription factors Rel/Dorsal transcription factors, DNA-binding domain p65 subunit of NF-kappa B (NFKB), N-terminal domain Human (Homo sapiens) [TaxId: 9606]
C20-189 d1nfic2 All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f p53-like transcription factors Rel/Dorsal transcription factors, DNA-binding domain p65 subunit of NF-kappa B (NFKB), N-terminal domain Human (Homo sapiens) [TaxId: 9606]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
E PF13637 Ank_4 Ankyrin repeats (many copies) Domain PFAM PF13637
A PF00554 RHD Rel homology domain (RHD) Domain Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See Pfam:PF01833) that binds to DNA. PFAM PF00554
E PF13857 Ank_5 Ankyrin repeats (many copies) Domain PFAM PF13857

Protein Modification Annotation

Type PDB Residue Nr. Description