Macromolecule Annotations for the Entities in PDB 1NEX

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A116-185 d1nexa1 All alpha proteins Skp1 dimerisation domain-like Skp1 dimerisation domain-like Skp1 dimerisation domain-like Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
A4-103 d1nexa2 Alpha and beta proteins (a+b) POZ domain POZ domain BTB/POZ domain Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
B270-369 d1nexb1 All alpha proteins F-box domain F-box domain F-box domain Cdc4 F-box and linker domains Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
B370-744 d1nexb2 All beta proteins 7-bladed beta-propeller WD40 repeat-like WD40-repeat Cdc4 propeller domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
C116-186 d1nexc1 All alpha proteins Skp1 dimerisation domain-like Skp1 dimerisation domain-like Skp1 dimerisation domain-like Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
C4-103 d1nexc2 Alpha and beta proteins (a+b) POZ domain POZ domain BTB/POZ domain Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
D270-369 d1nexd1 All alpha proteins F-box domain F-box domain F-box domain Cdc4 F-box and linker domains Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
D370-744 d1nexd2 All beta proteins 7-bladed beta-propeller WD40 repeat-like WD40-repeat Cdc4 propeller domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,C Centromere DNA-binding protein complex CBF3 subunit D (1NEX:A,C)
  • none
  • none
B,D CDC4 protein (1NEX:B,D)
  • none
  • none
  • none
E,F GLL(TPO)PPQSG (1NEX:E,F)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description