Macromolecule Annotations for the Entities in PDB 1N9E

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A316-775 d1n9ea1 All beta proteins Supersandwich Amine oxidase catalytic domain Amine oxidase catalytic domain Lysyl oxidase PplO, domain 3 Yeast (Pichia pastoris) [TaxId: 4922]
A41-169 d1n9ea2 Alpha and beta proteins (a+b) Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region Lysyl oxidase PplO, domains 1 and 2 Yeast (Pichia pastoris) [TaxId: 4922]
A170-315 d1n9ea3 Alpha and beta proteins (a+b) Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region Lysyl oxidase PplO, domains 1 and 2 Yeast (Pichia pastoris) [TaxId: 4922]
B316-775 d1n9eb1 All beta proteins Supersandwich Amine oxidase catalytic domain Amine oxidase catalytic domain Lysyl oxidase PplO, domain 3 Yeast (Pichia pastoris) [TaxId: 4922]
B41-169 d1n9eb2 Alpha and beta proteins (a+b) Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region Lysyl oxidase PplO, domains 1 and 2 Yeast (Pichia pastoris) [TaxId: 4922]
B170-315 d1n9eb3 Alpha and beta proteins (a+b) Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region Lysyl oxidase PplO, domains 1 and 2 Yeast (Pichia pastoris) [TaxId: 4922]
C316-775 d1n9ec1 All beta proteins Supersandwich Amine oxidase catalytic domain Amine oxidase catalytic domain Lysyl oxidase PplO, domain 3 Yeast (Pichia pastoris) [TaxId: 4922]
C41-169 d1n9ec2 Alpha and beta proteins (a+b) Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region Lysyl oxidase PplO, domains 1 and 2 Yeast (Pichia pastoris) [TaxId: 4922]
C170-315 d1n9ec3 Alpha and beta proteins (a+b) Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region Lysyl oxidase PplO, domains 1 and 2 Yeast (Pichia pastoris) [TaxId: 4922]
D316-775 d1n9ed1 All beta proteins Supersandwich Amine oxidase catalytic domain Amine oxidase catalytic domain Lysyl oxidase PplO, domain 3 Yeast (Pichia pastoris) [TaxId: 4922]
D41-169 d1n9ed2 Alpha and beta proteins (a+b) Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region Lysyl oxidase PplO, domains 1 and 2 Yeast (Pichia pastoris) [TaxId: 4922]
D170-315 d1n9ed3 Alpha and beta proteins (a+b) Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region Lysyl oxidase PplO, domains 1 and 2 Yeast (Pichia pastoris) [TaxId: 4922]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF01179 Cu_amine_oxid Copper amine oxidase, enzyme domain Domain Copper amine oxidases are a ubiquitous and novel group of quinoenzymes that catalyse the oxidative deamination of primary amines to the corresponding aldehydes, with concomitant reduction of molecular oxygen to hydrogen peroxide. The enzymes are dimers of identical 70-90 kDa subunits, each of which contains a single copper ion and a covalently bound cofactor formed by the post-translational modification of a tyrosine side chain to 2,4,5-trihydroxyphenylalanine quinone (TPQ). This family corresponds to the catalytic domain of the enzyme. PFAM PF01179
A PF09248 DUF1965 Domain of unknown function (DUF1965) Domain Members of this family of fungal domains adopt a structure that consists of an alpha/beta motif. Their exact function has not, as yet, been determined [1]. PFAM PF09248
A PF02727 Cu_amine_oxidN2 Copper amine oxidase, N2 domain Domain This domain is the first or second structural domain in copper amine oxidases, it is known as the N2 domain. Its function is uncertain. The catalytic domain can be found in Pfam:PF01179. Copper amine oxidases are a ubiquitous and novel group of quinoenzymes that catalyse the oxidative deamination of primary amines to the corresponding aldehydes, with concomitant reduction of molecular oxygen to hydrogen peroxide. The enzymes are dimers of identical 70-90 kDa subunits, each of which contains a single copper ion and a covalently bound cofactor formed by the post-translational modification of a tyrosine side chain to 2,4,5-trihydroxyphenylalanine quinone (TPQ). PFAM PF02727

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D LYSYL OXIDASE (1N9E:A,B,C,D)
  • none
SUGAR (2-MER) (1N9E:)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description