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139555
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
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Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1N9E
Crystal structure of Pichia pastoris Lysyl Oxidase PPLO
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
Download Files
FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Structure Factor (Text)
Structure Factor (gz)
Biological Assembly 1 (gz) (A+S)
Biological Assembly 2 (gz) (A+S)
Macromolecule Annotations for the Entities in PDB 1N9E
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A316-775
d1n9ea1
All beta proteins
Supersandwich
Amine oxidase catalytic domain
Amine oxidase catalytic domain
Lysyl oxidase PplO, domain 3
Yeast (Pichia pastoris) [TaxId: 4922]
A41-169
d1n9ea2
Alpha and beta proteins (a+b)
Cystatin-like
Amine oxidase N-terminal region
Amine oxidase N-terminal region
Lysyl oxidase PplO, domains 1 and 2
Yeast (Pichia pastoris) [TaxId: 4922]
A170-315
d1n9ea3
Alpha and beta proteins (a+b)
Cystatin-like
Amine oxidase N-terminal region
Amine oxidase N-terminal region
Lysyl oxidase PplO, domains 1 and 2
Yeast (Pichia pastoris) [TaxId: 4922]
B316-775
d1n9eb1
All beta proteins
Supersandwich
Amine oxidase catalytic domain
Amine oxidase catalytic domain
Lysyl oxidase PplO, domain 3
Yeast (Pichia pastoris) [TaxId: 4922]
B41-169
d1n9eb2
Alpha and beta proteins (a+b)
Cystatin-like
Amine oxidase N-terminal region
Amine oxidase N-terminal region
Lysyl oxidase PplO, domains 1 and 2
Yeast (Pichia pastoris) [TaxId: 4922]
B170-315
d1n9eb3
Alpha and beta proteins (a+b)
Cystatin-like
Amine oxidase N-terminal region
Amine oxidase N-terminal region
Lysyl oxidase PplO, domains 1 and 2
Yeast (Pichia pastoris) [TaxId: 4922]
C316-775
d1n9ec1
All beta proteins
Supersandwich
Amine oxidase catalytic domain
Amine oxidase catalytic domain
Lysyl oxidase PplO, domain 3
Yeast (Pichia pastoris) [TaxId: 4922]
C41-169
d1n9ec2
Alpha and beta proteins (a+b)
Cystatin-like
Amine oxidase N-terminal region
Amine oxidase N-terminal region
Lysyl oxidase PplO, domains 1 and 2
Yeast (Pichia pastoris) [TaxId: 4922]
C170-315
d1n9ec3
Alpha and beta proteins (a+b)
Cystatin-like
Amine oxidase N-terminal region
Amine oxidase N-terminal region
Lysyl oxidase PplO, domains 1 and 2
Yeast (Pichia pastoris) [TaxId: 4922]
D316-775
d1n9ed1
All beta proteins
Supersandwich
Amine oxidase catalytic domain
Amine oxidase catalytic domain
Lysyl oxidase PplO, domain 3
Yeast (Pichia pastoris) [TaxId: 4922]
D41-169
d1n9ed2
Alpha and beta proteins (a+b)
Cystatin-like
Amine oxidase N-terminal region
Amine oxidase N-terminal region
Lysyl oxidase PplO, domains 1 and 2
Yeast (Pichia pastoris) [TaxId: 4922]
D170-315
d1n9ed3
Alpha and beta proteins (a+b)
Cystatin-like
Amine oxidase N-terminal region
Amine oxidase N-terminal region
Lysyl oxidase PplO, domains 1 and 2
Yeast (Pichia pastoris) [TaxId: 4922]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1n9eA01
Mainly Beta
Distorted Sandwich
Beta-galactosidase; Chain A, domain 5
Copper amine oxidase, Domain 3
A2
1n9eA02
Alpha Beta
Roll
Nuclear Transport Factor 2; Chain: A,
A3
1n9eA03
Alpha Beta
Roll
Nuclear Transport Factor 2; Chain: A,
B1
1n9eB01
Mainly Beta
Distorted Sandwich
Beta-galactosidase; Chain A, domain 5
Copper amine oxidase, Domain 3
B2
1n9eB02
Alpha Beta
Roll
Nuclear Transport Factor 2; Chain: A,
B3
1n9eB03
Alpha Beta
Roll
Nuclear Transport Factor 2; Chain: A,
C1
1n9eC01
Mainly Beta
Distorted Sandwich
Beta-galactosidase; Chain A, domain 5
Copper amine oxidase, Domain 3
C2
1n9eC02
Alpha Beta
Roll
Nuclear Transport Factor 2; Chain: A,
C3
1n9eC03
Alpha Beta
Roll
Nuclear Transport Factor 2; Chain: A,
D1
1n9eD01
Mainly Beta
Distorted Sandwich
Beta-galactosidase; Chain A, domain 5
Copper amine oxidase, Domain 3
D2
1n9eD02
Alpha Beta
Roll
Nuclear Transport Factor 2; Chain: A,
D3
1n9eD03
Alpha Beta
Roll
Nuclear Transport Factor 2; Chain: A,
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A,B,C,D
LYSYL OXIDASE (1N9E:A,B,C,D)
Copper Ion Binding
Primary Amine Oxidase Activity
Quinone Binding
Amine Metabolic Process
Oxidation Reduction Process
none
Protein Modification Annotation
Type
PDB Residue Nr.
Description