Macromolecule Annotations for the Entities in PDB 1N6D

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A763-853 d1n6da1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
A39-319 d1n6da2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain Archaeon Thermoplasma acidophilum [TaxId: 2303]
A320-679 d1n6da3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 Archaeon Thermoplasma acidophilum [TaxId: 2303]
A680-762,A854-1061 d1n6da4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
B763-853 d1n6db1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
B39-319 d1n6db2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain Archaeon Thermoplasma acidophilum [TaxId: 2303]
B320-679 d1n6db3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 Archaeon Thermoplasma acidophilum [TaxId: 2303]
B680-762,B854-1061 d1n6db4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
C763-853 d1n6dc1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
C39-319 d1n6dc2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain Archaeon Thermoplasma acidophilum [TaxId: 2303]
C320-679 d1n6dc3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 Archaeon Thermoplasma acidophilum [TaxId: 2303]
C680-762,C854-1061 d1n6dc4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
D763-853 d1n6dd1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
D39-319 d1n6dd2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain Archaeon Thermoplasma acidophilum [TaxId: 2303]
D320-679 d1n6dd3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 Archaeon Thermoplasma acidophilum [TaxId: 2303]
D680-762,D854-1061 d1n6dd4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
E763-853 d1n6de1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
E39-319 d1n6de2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain Archaeon Thermoplasma acidophilum [TaxId: 2303]
E320-679 d1n6de3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 Archaeon Thermoplasma acidophilum [TaxId: 2303]
E680-762,E854-1061 d1n6de4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
F763-853 d1n6df1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]
F39-319 d1n6df2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain Archaeon Thermoplasma acidophilum [TaxId: 2303]
F320-679 d1n6df3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 Archaeon Thermoplasma acidophilum [TaxId: 2303]
F680-762,F854-1061 d1n6df4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease Archaeon Thermoplasma acidophilum [TaxId: 2303]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1n6dA01 Mainly Beta 6 Propellor Neuraminidase Tricorn protease N-terminal domain
A2 1n6dA02 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
A3 1n6dA03 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA
A4 1n6dA04 Mainly Beta Roll Pdz3 Domain
A5 1n6dA05 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase; Chain A, domain 1 2-enoyl-CoA Hydratase; Chain A, domain 1
B1 1n6dB01 Mainly Beta 6 Propellor Neuraminidase Tricorn protease N-terminal domain
B2 1n6dB02 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
B3 1n6dB03 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA
B4 1n6dB04 Mainly Beta Roll Pdz3 Domain
B5 1n6dB05 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase; Chain A, domain 1 2-enoyl-CoA Hydratase; Chain A, domain 1
C1 1n6dC01 Mainly Beta 6 Propellor Neuraminidase Tricorn protease N-terminal domain
C2 1n6dC02 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
C3 1n6dC03 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA
C4 1n6dC04 Mainly Beta Roll Pdz3 Domain
C5 1n6dC05 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase; Chain A, domain 1 2-enoyl-CoA Hydratase; Chain A, domain 1
D1 1n6dD01 Mainly Beta 6 Propellor Neuraminidase Tricorn protease N-terminal domain
D2 1n6dD02 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
D3 1n6dD03 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA
D4 1n6dD04 Mainly Beta Roll Pdz3 Domain
D5 1n6dD05 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase; Chain A, domain 1 2-enoyl-CoA Hydratase; Chain A, domain 1
E1 1n6dE01 Mainly Beta 6 Propellor Neuraminidase Tricorn protease N-terminal domain
E2 1n6dE02 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
E3 1n6dE03 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA
E4 1n6dE04 Mainly Beta Roll Pdz3 Domain
E5 1n6dE05 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase; Chain A, domain 1 2-enoyl-CoA Hydratase; Chain A, domain 1
F1 1n6dF01 Mainly Beta 6 Propellor Neuraminidase Tricorn protease N-terminal domain
F2 1n6dF02 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
F3 1n6dF03 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA
F4 1n6dF04 Mainly Beta Roll Pdz3 Domain
F5 1n6dF05 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase; Chain A, domain 1 2-enoyl-CoA Hydratase; Chain A, domain 1

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF03572 Peptidase_S41 Peptidase family S41 Family
A PF14685 Tricorn_PDZ Tricorn protease PDZ domain Domain This domain is the PDZ domain of tricorn protease [1]. PFAM PF14685
A PF07676 PD40 WD40-like Beta Propeller Repeat Repeat
A PF14684 Tricorn_C1 Tricorn protease C1 domain Domain This domain is the C1 core domain of tricorn protease. This is a mixed alpha-beta domain [1]. PFAM PF14684

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D,E,F tricorn protease (1N6D:A,B,C,D,E,F)
G,H,I,J,K,L RVRK (1N6D:G,H,I,J,K,L)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description