Macromolecule Annotations for the Entities in PDB 1N61

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A82-163 d1n61a1 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C- domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
A3-81 d1n61a2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Carbone monoxide (CO) dehydrogenase iron- sulfur protein, N-domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
B6-146 d1n61b1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain- like CO dehydrogenase molybdoprotein N-domain- like Carbon monoxide (CO) dehydrogenase molybdoprotein, N- domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
B147-809 d1n61b2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Carbon monoxide (CO) dehydrogenase molybdoprotein Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
C178-287 d1n61c1 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain- like CO dehydrogenase flavoprotein C-terminal domain- like Carbon monoxide (CO) dehydrogenase flavoprotein, C- terminal domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
C1-177 d1n61c2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain- like FAD-binding/transporter-associated domain- like CO dehydrogenase flavoprotein N-terminal domain- like Carbon monoxide (CO) dehydrogenase flavoprotein, N- terminal domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
D82-160 d1n61d1 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C- domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
D3-81 d1n61d2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Carbone monoxide (CO) dehydrogenase iron- sulfur protein, N-domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
E15-146 d1n61e1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain- like CO dehydrogenase molybdoprotein N-domain- like Carbon monoxide (CO) dehydrogenase molybdoprotein, N- domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
E147-809 d1n61e2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Carbon monoxide (CO) dehydrogenase molybdoprotein Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
F178-286 d1n61f1 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain- like CO dehydrogenase flavoprotein C-terminal domain- like Carbon monoxide (CO) dehydrogenase flavoprotein, C- terminal domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
F1-177 d1n61f2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain- like FAD-binding/transporter-associated domain- like CO dehydrogenase flavoprotein N-terminal domain- like Carbon monoxide (CO) dehydrogenase flavoprotein, N- terminal domain Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1n61A01 Alpha Beta Roll Ubiquitin-like (UB roll)
A2 1n61A02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1
B1 1n61B01 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3
B2 1n61B02 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
B3 1n61B03 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
B4 1n61B04 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
B5 1n61B05 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
C1 1n61C01 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2
C2 1n61C02 Alpha Beta 2-Layer Sandwich Enolase-like; domain 1
C3 1n61C03 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3
D1 1n61D01 Alpha Beta Roll Ubiquitin-like (UB roll)
D2 1n61D02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1
E1 1n61E01 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3
E2 1n61E02 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
E3 1n61E03 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
E4 1n61E04 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
E5 1n61E05 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
F1 1n61F01 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2
F2 1n61F02 Alpha Beta 2-Layer Sandwich Enolase-like; domain 1
F3 1n61F03 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF01315 Ald_Xan_dh_C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Domain PFAM PF01315
A PF01799 Fer2_2 [2Fe-2S] binding domain Domain PFAM PF01799
B PF02738 Ald_Xan_dh_C2 Molybdopterin-binding domain of aldehyde dehydrogenase Domain PFAM PF02738
A PF00111 Fer2 2Fe-2S iron-sulfur cluster binding domain Domain PFAM PF00111
C PF03450 CO_deh_flav_C CO dehydrogenase flavoprotein C-terminal domain Domain PFAM PF03450
C PF00941 FAD_binding_5 FAD binding domain in molybdopterin dehydrogenase Family

Protein Modification Annotation

Type PDB Residue Nr. Description