Macromolecule Annotations for the Entities in PDB 1N0V

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
C344-481 d1n0vc1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor 2 (eEF-2), domain II Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
C2-343 d1n0vc2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor 2 (eEF-2), N-terminal (G) domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
C561-725 d1n0vc3 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Translational machinery components Elongation factor 2 (eEF-2), domain IV Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
C482-560 d1n0vc4 Alpha and beta proteins (a+b) Ferredoxin-like EF-G C-terminal domain-like EF-G/eEF-2 domains III and V Elongation factor 2 (eEF-2) Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
C726-842 d1n0vc5 Alpha and beta proteins (a+b) Ferredoxin-like EF-G C-terminal domain-like EF-G/eEF-2 domains III and V Elongation factor 2 (eEF-2) Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
D344-481 d1n0vd1 All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Elongation factors Elongation factor 2 (eEF-2), domain II Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
D2-343 d1n0vd2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins Elongation factor 2 (eEF-2), N-terminal (G) domain Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
D561-725 d1n0vd3 Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Translational machinery components Elongation factor 2 (eEF-2), domain IV Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
D482-560 d1n0vd4 Alpha and beta proteins (a+b) Ferredoxin-like EF-G C-terminal domain-like EF-G/eEF-2 domains III and V Elongation factor 2 (eEF-2) Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
D726-842 d1n0vd5 Alpha and beta proteins (a+b) Ferredoxin-like EF-G C-terminal domain-like EF-G/eEF-2 domains III and V Elongation factor 2 (eEF-2) Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
C PF03144 GTP_EFTU_D2 Elongation factor Tu domain 2 Domain Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain. PFAM PF03144
C PF14492 EFG_II Elongation Factor G, domain II Domain This domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). PFAM PF14492
C PF00009 GTP_EFTU Elongation factor Tu GTP binding domain Domain This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. PFAM PF00009
C PF03764 EFG_IV Elongation factor G, domain IV Domain This domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold. PFAM PF03764
C PF00679 EFG_C Elongation factor G C-terminus Domain This domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold. PFAM PF00679

Protein Modification Annotation

Type PDB Residue Nr. Description