Macromolecule Annotations for the Entities in PDB 1MJ1

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
O PF00164 Ribosom_S12_S23 Ribosomal protein S12/S23 Family
L PF03946 Ribosomal_L11_N Ribosomal protein L11, N-terminal domain Domain The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. PFAM PF03946
P PF00416 Ribosomal_S13 Ribosomal protein S13/S18 Family
A PF03143 GTP_EFTU_D3 Elongation factor Tu C-terminal domain Domain Elongation factor Tu consists of three structural domains, this is the third domain. This domain adopts a beta barrel structure. This the third domain is involved in binding to both charged tRNA [1] and binding to EF-Ts Pfam:PF00889 [2]. PFAM PF03143
A PF03144 GTP_EFTU_D2 Elongation factor Tu domain 2 Domain Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain. PFAM PF03144
A PF00009 GTP_EFTU Elongation factor Tu GTP binding domain Domain This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. PFAM PF00009
L PF00298 Ribosomal_L11 Ribosomal protein L11, RNA binding domain Domain PFAM PF00298

Protein Modification Annotation

Type PDB Residue Nr. Description