Macromolecule Annotations for the Entities in PDB 1MHH

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-107 d1mhha1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL- kappa Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]
A108-213 d1mhha2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin light chain kappa constant domain, CL- kappa Mouse (Mus musculus) [TaxId: 10090]
B1-113 d1mhhb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH Mouse (Mus musculus), cluster 4 [TaxId: 10090]
B114-212 d1mhhb2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin heavy chain gamma constant domain 1, CH1- gamma Mouse (Mus musculus) [TaxId: 10090]
C1-107 d1mhhc1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL- kappa Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]
C108-213 d1mhhc2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin light chain kappa constant domain, CL- kappa Mouse (Mus musculus) [TaxId: 10090]
D1-113 d1mhhd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH Mouse (Mus musculus), cluster 4 [TaxId: 10090]
D114-212 d1mhhd2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin heavy chain gamma constant domain 1, CH1- gamma Mouse (Mus musculus) [TaxId: 10090]
E d1mhhe_ Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Immunoglobulin-binding domains Immunoglobulin-binding domains Immunoglobulin light chain-binding domain of protein L Peptostreptococcus magnus [TaxId: 1260]
F d1mhhf_ Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Immunoglobulin-binding domains Immunoglobulin-binding domains Immunoglobulin light chain-binding domain of protein L Peptostreptococcus magnus [TaxId: 1260]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
E PF02246 B1 Protein L b1 domain Domain Protein L is a bacterial protein with immunoglobulin (Ig) light chain-binding properties. It contains a number of homologous b1 repeats towards the N-terminus. These repeats have been found to be responsible for the interaction of protein L with Ig light chains [1]. PFAM PF02246
B PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
A PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
A PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654

Protein Modification Annotation

Type PDB Residue Nr. Description