Macromolecule Annotations for the Entities in PDB 1MG2

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1mg2a_ All beta proteins 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Methylamine dehydrogenase, H-chain Paracoccus denitrificans [TaxId: 266]
B d1mg2b_ Small proteins Methylamine dehydrogenase, L chain Methylamine dehydrogenase, L chain Methylamine dehydrogenase, L chain Methylamine dehydrogenase Paracoccus denitrificans [TaxId: 266]
C d1mg2c_ All beta proteins Cupredoxin-like Cupredoxins Plastocyanin/azurin-like Amicyanin Paracoccus denitrificans [TaxId: 266]
D d1mg2d_ All alpha proteins Cytochrome c Cytochrome c monodomain cytochrome c Cytochrome c551 Paracoccus denitrificans [TaxId: 266]
E d1mg2e_ All beta proteins 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Methylamine dehydrogenase, H-chain Paracoccus denitrificans [TaxId: 266]
F d1mg2f_ Small proteins Methylamine dehydrogenase, L chain Methylamine dehydrogenase, L chain Methylamine dehydrogenase, L chain Methylamine dehydrogenase Paracoccus denitrificans [TaxId: 266]
G d1mg2g_ All beta proteins Cupredoxin-like Cupredoxins Plastocyanin/azurin-like Amicyanin Paracoccus denitrificans [TaxId: 266]
H d1mg2h_ All alpha proteins Cytochrome c Cytochrome c monodomain cytochrome c Cytochrome c551 Paracoccus denitrificans [TaxId: 266]
I d1mg2i_ All beta proteins 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Methylamine dehydrogenase, H-chain Paracoccus denitrificans [TaxId: 266]
J d1mg2j_ Small proteins Methylamine dehydrogenase, L chain Methylamine dehydrogenase, L chain Methylamine dehydrogenase, L chain Methylamine dehydrogenase Paracoccus denitrificans [TaxId: 266]
K d1mg2k_ All beta proteins Cupredoxin-like Cupredoxins Plastocyanin/azurin-like Amicyanin Paracoccus denitrificans [TaxId: 266]
L d1mg2l_ All alpha proteins Cytochrome c Cytochrome c monodomain cytochrome c Cytochrome c551 Paracoccus denitrificans [TaxId: 266]
M d1mg2m_ All beta proteins 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Methylamine dehydrogenase, H-chain Paracoccus denitrificans [TaxId: 266]
N d1mg2n_ Small proteins Methylamine dehydrogenase, L chain Methylamine dehydrogenase, L chain Methylamine dehydrogenase, L chain Methylamine dehydrogenase Paracoccus denitrificans [TaxId: 266]
O d1mg2o_ All beta proteins Cupredoxin-like Cupredoxins Plastocyanin/azurin-like Amicyanin Paracoccus denitrificans [TaxId: 266]
P d1mg2p_ All alpha proteins Cytochrome c Cytochrome c monodomain cytochrome c Cytochrome c551 Paracoccus denitrificans [TaxId: 266]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A 1mg2A00 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
B 1mg2B00 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Electron Transport Ethylamine Dehydrogenase
C 1mg2C00 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteins
D 1mg2D00 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex; Chain D, domain 2 Cytochrome c
E 1mg2E00 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
F 1mg2F00 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Electron Transport Ethylamine Dehydrogenase
G 1mg2G00 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteins
H 1mg2H00 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex; Chain D, domain 2 Cytochrome c
I 1mg2I00 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
J 1mg2J00 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Electron Transport Ethylamine Dehydrogenase
K 1mg2K00 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteins
L 1mg2L00 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex; Chain D, domain 2 Cytochrome c
M 1mg2M00 Mainly Beta 7 Propellor Methylamine Dehydrogenase; Chain H YVTN repeat-like/Quinoprotein amine dehydrogenase
N 1mg2N00 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Electron Transport Ethylamine Dehydrogenase
O 1mg2O00 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteins
P 1mg2P00 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex; Chain D, domain 2 Cytochrome c

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF06433 Me-amine-dh_H Methylamine dehydrogenase heavy chain (MADH) Domain Methylamine dehydrogenase (EC:1.4.99.3) a periplasmic quinoprotein found in several methyltrophic bacteria. Induced when grown on methylamine as a carbon source MADH catalyses the oxidative deamination of amines to there corresponding aldehydes. MADH is a hetero- tetramer, comprised of two heavy chains (H) and two light chains (L). The H-chain forms a beta-propeller like structure [1]. PFAM PF06433
D PF13442 Cytochrome_CBB3 Cytochrome C oxidase, cbb3-type, subunit III Domain PFAM PF13442
C PF00127 Copper-bind Copper binding proteins, plastocyanin/azurin family Domain PFAM PF00127
B PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain Domain PFAM PF02975

Protein Modification Annotation

Type PDB Residue Nr. Description