Macromolecule Annotations for the Entities in PDB 1M9S

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF12354 Internalin_N Bacterial adhesion/invasion protein N terminal Domain This domain family is found in bacteria, and is approximately 60 amino acids in length. The family is found in association with Pfam:PF00560, Pfam:PF08191, Pfam:PF09479. There are two completely conserved residues (I and F) that may be functionally important. Internalin mediates bacterial adhesion and invasion of epithelial cells in the human intestine through specific interaction with its host cell receptor E-cadherin. This family is the N terminal of internalin, the cap domain of the protein. The cap domain is conserved between different internalin types. The cap domain does not interact with E cadherin, therefore its function is presumably structural: capping the hydrophobic core. PFAM PF12354
A PF13457 SH3_8 SH3-like domain Domain PFAM PF13457
A PF12799 LRR_4 Leucine Rich repeats (2 copies) Family
A PF13457 SH3_8 SH3-like domain Domain PFAM PF13457
A PF09479 Flg_new Listeria-Bacteroides repeat domain (List_Bact_rpt) Family
A PF13855 LRR_8 Leucine rich repeat Repeat
A PF13457 SH3_8 SH3-like domain Domain PFAM PF13457
A PF08191 LRR_adjacent LRR adjacent Family

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A Internalin B (1M9S:A)

Protein Modification Annotation

Type PDB Residue Nr. Description