Macromolecule Annotations for the Entities in PDB 1M6V

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A403-555 d1m6va1 All alpha proteins Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Escherichia coli [TaxId: 562]
A936-1073 d1m6va2 Alpha and beta proteins (a/b) Methylglyoxal synthase-like Methylglyoxal synthase-like Carbamoyl phosphate synthetase, large subunit allosteric, C- terminal domain Carbamoyl phosphate synthetase, large subunit allosteric, C- terminal domain Escherichia coli [TaxId: 562]
A1-127 d1m6va3 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain BC N-terminal domain-like Carbamoyl phosphate synthetase (CPS), large subunit PreATP- grasp domains Escherichia coli [TaxId: 562]
A556-676 d1m6va4 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain BC N-terminal domain-like Carbamoyl phosphate synthetase (CPS), large subunit PreATP- grasp domains Escherichia coli [TaxId: 562]
A128-402 d1m6va5 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like BC ATP-binding domain-like Carbamoyl phosphate synthetase (CPS), large subunit ATP- binding domains Escherichia coli [TaxId: 562]
A677-935 d1m6va6 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like BC ATP-binding domain-like Carbamoyl phosphate synthetase (CPS), large subunit ATP- binding domains Escherichia coli [TaxId: 562]
B2-152 d1m6vb1 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Escherichia coli [TaxId: 562]
B153-380 d1m6vb2 Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Carbamoyl phosphate synthetase, small subunit C- terminal domain Escherichia coli [TaxId: 562]
C403-555 d1m6vc1 All alpha proteins Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Escherichia coli [TaxId: 562]
C936-1073 d1m6vc2 Alpha and beta proteins (a/b) Methylglyoxal synthase-like Methylglyoxal synthase-like Carbamoyl phosphate synthetase, large subunit allosteric, C- terminal domain Carbamoyl phosphate synthetase, large subunit allosteric, C- terminal domain Escherichia coli [TaxId: 562]
C1-127 d1m6vc3 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain BC N-terminal domain-like Carbamoyl phosphate synthetase (CPS), large subunit PreATP- grasp domains Escherichia coli [TaxId: 562]
C556-676 d1m6vc4 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain BC N-terminal domain-like Carbamoyl phosphate synthetase (CPS), large subunit PreATP- grasp domains Escherichia coli [TaxId: 562]
C128-402 d1m6vc5 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like BC ATP-binding domain-like Carbamoyl phosphate synthetase (CPS), large subunit ATP- binding domains Escherichia coli [TaxId: 562]
C677-935 d1m6vc6 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like BC ATP-binding domain-like Carbamoyl phosphate synthetase (CPS), large subunit ATP- binding domains Escherichia coli [TaxId: 562]
D2-152 d1m6vd1 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Escherichia coli [TaxId: 562]
D153-380 d1m6vd2 Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Carbamoyl phosphate synthetase, small subunit C- terminal domain Escherichia coli [TaxId: 562]
E403-555 d1m6ve1 All alpha proteins Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Escherichia coli [TaxId: 562]
E936-1073 d1m6ve2 Alpha and beta proteins (a/b) Methylglyoxal synthase-like Methylglyoxal synthase-like Carbamoyl phosphate synthetase, large subunit allosteric, C- terminal domain Carbamoyl phosphate synthetase, large subunit allosteric, C- terminal domain Escherichia coli [TaxId: 562]
E1-127 d1m6ve3 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain BC N-terminal domain-like Carbamoyl phosphate synthetase (CPS), large subunit PreATP- grasp domains Escherichia coli [TaxId: 562]
E556-676 d1m6ve4 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain BC N-terminal domain-like Carbamoyl phosphate synthetase (CPS), large subunit PreATP- grasp domains Escherichia coli [TaxId: 562]
E128-402 d1m6ve5 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like BC ATP-binding domain-like Carbamoyl phosphate synthetase (CPS), large subunit ATP- binding domains Escherichia coli [TaxId: 562]
E677-935 d1m6ve6 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like BC ATP-binding domain-like Carbamoyl phosphate synthetase (CPS), large subunit ATP- binding domains Escherichia coli [TaxId: 562]
F2-152 d1m6vf1 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Escherichia coli [TaxId: 562]
F153-380 d1m6vf2 Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Carbamoyl phosphate synthetase, small subunit C- terminal domain Escherichia coli [TaxId: 562]
G403-555 d1m6vg1 All alpha proteins Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Carbamoyl phosphate synthetase, large subunit connection domain Escherichia coli [TaxId: 562]
G936-1073 d1m6vg2 Alpha and beta proteins (a/b) Methylglyoxal synthase-like Methylglyoxal synthase-like Carbamoyl phosphate synthetase, large subunit allosteric, C- terminal domain Carbamoyl phosphate synthetase, large subunit allosteric, C- terminal domain Escherichia coli [TaxId: 562]
G1-127 d1m6vg3 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain BC N-terminal domain-like Carbamoyl phosphate synthetase (CPS), large subunit PreATP- grasp domains Escherichia coli [TaxId: 562]
G556-676 d1m6vg4 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain BC N-terminal domain-like Carbamoyl phosphate synthetase (CPS), large subunit PreATP- grasp domains Escherichia coli [TaxId: 562]
G128-402 d1m6vg5 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like BC ATP-binding domain-like Carbamoyl phosphate synthetase (CPS), large subunit ATP- binding domains Escherichia coli [TaxId: 562]
G677-935 d1m6vg6 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain- like BC ATP-binding domain-like Carbamoyl phosphate synthetase (CPS), large subunit ATP- binding domains Escherichia coli [TaxId: 562]
H2-152 d1m6vh1 Alpha and beta proteins (a/b) The "swivelling" beta/beta/alpha domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Carbamoyl phosphate synthetase, small subunit N- terminal domain Escherichia coli [TaxId: 562]
H153-380 d1m6vh2 Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Carbamoyl phosphate synthetase, small subunit C- terminal domain Escherichia coli [TaxId: 562]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1m6vA01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
A2 1m6vA02 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
A3 1m6vA03 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
A4 1m6vA04 Mainly Alpha Orthogonal Bundle Carbamoyl Phosphate Synthetase; Chain A, domain 4 Carbamoyl Phosphate Synthetase; Chain A, domain 4
A5 1m6vA05 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
A6 1m6vA06 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
A7 1m6vA07 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
A8 1m6vA08 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
B1 1m6vB01 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Carbamoyl phosphate synthetase, small subunit N- terminal domain
B2 1m6vB02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
C1 1m6vC01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
C2 1m6vC02 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
C3 1m6vC03 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
C4 1m6vC04 Mainly Alpha Orthogonal Bundle Carbamoyl Phosphate Synthetase; Chain A, domain 4 Carbamoyl Phosphate Synthetase; Chain A, domain 4
C5 1m6vC05 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
C6 1m6vC06 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
C7 1m6vC07 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
C8 1m6vC08 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
D1 1m6vD01 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Carbamoyl phosphate synthetase, small subunit N- terminal domain
D2 1m6vD02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
E1 1m6vE01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
E2 1m6vE02 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
E3 1m6vE03 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
E4 1m6vE04 Mainly Alpha Orthogonal Bundle Carbamoyl Phosphate Synthetase; Chain A, domain 4 Carbamoyl Phosphate Synthetase; Chain A, domain 4
E5 1m6vE05 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
E6 1m6vE06 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
E7 1m6vE07 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
E8 1m6vE08 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
F1 1m6vF01 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Carbamoyl phosphate synthetase, small subunit N- terminal domain
F2 1m6vF02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
G1 1m6vG01 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
G2 1m6vG02 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
G3 1m6vG03 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
G4 1m6vG04 Mainly Alpha Orthogonal Bundle Carbamoyl Phosphate Synthetase; Chain A, domain 4 Carbamoyl Phosphate Synthetase; Chain A, domain 4
G5 1m6vG05 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
G6 1m6vG06 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase; Chain A, domain 1 ATP-grasp fold, B domain
G7 1m6vG07 Alpha Beta 2-Layer Sandwich Dna Ligase; domain 1 ATP-grasp fold, A domain
G8 1m6vG08 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
H1 1m6vH01 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Carbamoyl phosphate synthetase, small subunit N- terminal domain
H2 1m6vH02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Protein Modification Annotation

Type PDB Residue Nr. Description