Macromolecule Annotations for the Entities in PDB 1M5Y

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A25-164,A395-427 d1m5ya1 All alpha proteins Triger factor/SurA peptide-binding domain- like Triger factor/SurA peptide-binding domain- like Porin chaperone SurA, peptide-binding domain Porin chaperone SurA, peptide-binding domain Escherichia coli [TaxId: 562]
A172-278 d1m5ya2 Alpha and beta proteins (a+b) FKBP-like FKBP-like FKBP immunophilin/proline isomerase Porin chaperone SurA, PPIase domains Escherichia coli [TaxId: 562]
A279-386 d1m5ya3 Alpha and beta proteins (a+b) FKBP-like FKBP-like FKBP immunophilin/proline isomerase Porin chaperone SurA, PPIase domains Escherichia coli [TaxId: 562]
B25-163,B396-427 d1m5yb1 All alpha proteins Triger factor/SurA peptide-binding domain- like Triger factor/SurA peptide-binding domain- like Porin chaperone SurA, peptide-binding domain Porin chaperone SurA, peptide-binding domain Escherichia coli [TaxId: 562]
B172-274 d1m5yb2 Alpha and beta proteins (a+b) FKBP-like FKBP-like FKBP immunophilin/proline isomerase Porin chaperone SurA, PPIase domains Escherichia coli [TaxId: 562]
B283-385 d1m5yb3 Alpha and beta proteins (a+b) FKBP-like FKBP-like FKBP immunophilin/proline isomerase Porin chaperone SurA, PPIase domains Escherichia coli [TaxId: 562]
C25-163,C396-427 d1m5yc1 All alpha proteins Triger factor/SurA peptide-binding domain- like Triger factor/SurA peptide-binding domain- like Porin chaperone SurA, peptide-binding domain Porin chaperone SurA, peptide-binding domain Escherichia coli [TaxId: 562]
C172-273 d1m5yc2 Alpha and beta proteins (a+b) FKBP-like FKBP-like FKBP immunophilin/proline isomerase Porin chaperone SurA, PPIase domains Escherichia coli [TaxId: 562]
C283-385 d1m5yc3 Alpha and beta proteins (a+b) FKBP-like FKBP-like FKBP immunophilin/proline isomerase Porin chaperone SurA, PPIase domains Escherichia coli [TaxId: 562]
D25-163,D396-428 d1m5yd1 All alpha proteins Triger factor/SurA peptide-binding domain- like Triger factor/SurA peptide-binding domain- like Porin chaperone SurA, peptide-binding domain Porin chaperone SurA, peptide-binding domain Escherichia coli [TaxId: 562]
D172-278 d1m5yd2 Alpha and beta proteins (a+b) FKBP-like FKBP-like FKBP immunophilin/proline isomerase Porin chaperone SurA, PPIase domains Escherichia coli [TaxId: 562]
D279-388 d1m5yd3 Alpha and beta proteins (a+b) FKBP-like FKBP-like FKBP immunophilin/proline isomerase Porin chaperone SurA, PPIase domains Escherichia coli [TaxId: 562]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF09312 SurA_N SurA N-terminal domain Domain This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment. PFAM PF09312
A PF13616 Rotamase_3 PPIC-type PPIASE domain Domain Rotamases increase the rate of protein folding by catalysing the interconversion of cis-proline and trans-proline. PFAM PF13616
A PF00639 Rotamase PPIC-type PPIASE domain Domain Rotamases increase the rate of protein folding by catalysing the interconversion of cis-proline and trans-proline. PFAM PF00639

Protein Modification Annotation

Type PDB Residue Nr. Description