Macromolecule Annotations for the Entities in PDB 1M3Y

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A25-221 d1m3ya1 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Major capsid protein vp54 Paramecium bursaria chlorella virus 1, PBCV- 1 [TaxId: 10506]
A222-437 d1m3ya2 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Major capsid protein vp54 Paramecium bursaria chlorella virus 1, PBCV- 1 [TaxId: 10506]
B25-221 d1m3yb1 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Major capsid protein vp54 Paramecium bursaria chlorella virus 1, PBCV- 1 [TaxId: 10506]
B222-437 d1m3yb2 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Major capsid protein vp54 Paramecium bursaria chlorella virus 1, PBCV- 1 [TaxId: 10506]
C25-221 d1m3yc1 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Major capsid protein vp54 Paramecium bursaria chlorella virus 1, PBCV- 1 [TaxId: 10506]
C222-437 d1m3yc2 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Major capsid protein vp54 Paramecium bursaria chlorella virus 1, PBCV- 1 [TaxId: 10506]
D25-221 d1m3yd1 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Major capsid protein vp54 Paramecium bursaria chlorella virus 1, PBCV- 1 [TaxId: 10506]
D222-437 d1m3yd2 All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Major capsid protein vp54 Paramecium bursaria chlorella virus 1, PBCV- 1 [TaxId: 10506]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF04451 Capsid_NCLDV Large eukaryotic DNA virus major capsid protein Family

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D The Major capsid protein of PBCV-1, Vp54 (1M3Y:A,B,C,D)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description