Macromolecule Annotations for the Entities in PDB 1M3D

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A5-114 d1m3da1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
A115-227 d1m3da2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
B6-114 d1m3db1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
B115-229 d1m3db2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
C5-114 d1m3dc1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
C115-226 d1m3dc2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
D4-114 d1m3dd1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
D115-228 d1m3dd2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
E4-114 d1m3de1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
E115-227 d1m3de2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
F4-114 d1m3df1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
F115-226 d1m3df2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
G4-114 d1m3dg1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
G115-228 d1m3dg2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
H4-114 d1m3dh1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
H115-227 d1m3dh2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
I5-114 d1m3di1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
I115-226 d1m3di2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
J5-114 d1m3dj1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
J115-227 d1m3dj2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
K6-114 d1m3dk1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
K115-229 d1m3dk2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
L5-114 d1m3dl1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]
L115-226 d1m3dl2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Cow (Bos taurus) [TaxId: 9913]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A 1m3dA00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
B 1m3dB00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
C 1m3dC00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
D 1m3dD00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
E 1m3dE00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
F 1m3dF00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
G 1m3dG00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
H 1m3dH00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
I 1m3dI00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
J 1m3dJ00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
K 1m3dK00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV
L 1m3dL00 Mainly Beta Beta Complex Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,D,E,G,H,J,K Type IV Collagen Noncollagenous Domain- Alpha1 (1M3D:A,B,D,E,G,H,J,K)
  • none
C,F,I,L Type IV Collagen Noncollagenous Domain- Alpha2 (1M3D:C,F,I,L)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description