Macromolecule Annotations for the Entities in PDB 1LVO

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1lvoa_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) Transmissible gastroenteritis virus [TaxId: 11149]
B d1lvob_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) Transmissible gastroenteritis virus [TaxId: 11149]
C d1lvoc_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) Transmissible gastroenteritis virus [TaxId: 11149]
D d1lvod_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) Transmissible gastroenteritis virus [TaxId: 11149]
E d1lvoe_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) Transmissible gastroenteritis virus [TaxId: 11149]
F d1lvof_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) Transmissible gastroenteritis virus [TaxId: 11149]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1lvoA01 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
A2 1lvoA02 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
A3 1lvoA03 Mainly Alpha Orthogonal Bundle main proteinase (3clpro) structure, domain 3 main proteinase (3clpro) structure, domain 3
B1 1lvoB01 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
B2 1lvoB02 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
B3 1lvoB03 Mainly Alpha Orthogonal Bundle main proteinase (3clpro) structure, domain 3 main proteinase (3clpro) structure, domain 3
C1 1lvoC01 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
C2 1lvoC02 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
C3 1lvoC03 Mainly Alpha Orthogonal Bundle main proteinase (3clpro) structure, domain 3 main proteinase (3clpro) structure, domain 3
D1 1lvoD01 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
D2 1lvoD02 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
D3 1lvoD03 Mainly Alpha Orthogonal Bundle main proteinase (3clpro) structure, domain 3 main proteinase (3clpro) structure, domain 3
E1 1lvoE01 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
E2 1lvoE02 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
E3 1lvoE03 Mainly Alpha Orthogonal Bundle main proteinase (3clpro) structure, domain 3 main proteinase (3clpro) structure, domain 3
F1 1lvoF01 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
F2 1lvoF02 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases
F3 1lvoF03 Mainly Alpha Orthogonal Bundle main proteinase (3clpro) structure, domain 3 main proteinase (3clpro) structure, domain 3

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D,E,F Replicase, hydrolase domain (1LVO:A,B,C,D,E,F)
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description