Macromolecule Annotations for the Entities in PDB 1LQB

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
D PF11413 HIF-1 Hypoxia-inducible factor-1 Family
C PF01847 VHL von Hippel-Lindau disease tumour suppressor protein Domain VHL forms a ternary complex with the elonginB Swiss:O44226 and elonginC Swiss:O13292 proteins. This complex binds Cul2, which then is involved in regulation of vascular endothelial growth factor Swiss:P15692 mRNA. PFAM PF01847
A PF00240 ubiquitin Ubiquitin family Domain This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5]. PFAM PF00240
B PF03931 Skp1_POZ Skp1 family, tetramerisation domain Domain PFAM PF03931

Protein Modification Annotation

Type PDB Residue Nr. Description