Macromolecule Annotations for the Entities in PDB 1LNU

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A84-182 d1lnua1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC alpha chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
A1-83 d1lnua2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain Mouse (Mus musculus), I-AB [TaxId: 10090]
B121-217 d1lnub1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC beta chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
B1-120 d1lnub2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain Mouse (Mus musculus), I-AB [TaxId: 10090]
C84-182 d1lnuc1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC alpha chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
C1-83 d1lnuc2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain Mouse (Mus musculus), I-AB [TaxId: 10090]
D121-217 d1lnud1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC beta chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
D1-120 d1lnud2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain Mouse (Mus musculus), I-AB [TaxId: 10090]
E84-182 d1lnue1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC alpha chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
E1-83 d1lnue2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain Mouse (Mus musculus), I-AB [TaxId: 10090]
F121-217 d1lnuf1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC beta chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
F1-120 d1lnuf2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain Mouse (Mus musculus), I-AB [TaxId: 10090]
G84-182 d1lnug1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC alpha chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
G1-83 d1lnug2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain Mouse (Mus musculus), I-AB [TaxId: 10090]
H121-217 d1lnuh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Class II MHC beta chain, C-terminal domain Mouse (Mus musculus), I-A group [TaxId: 10090]
H1-120 d1lnuh2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain Mouse (Mus musculus), I-AB [TaxId: 10090]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1lnuA01 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
A2 1lnuA02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
B1 1lnuB01 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
B2 1lnuB02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
C1 1lnuC01 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
C2 1lnuC02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
D1 1lnuD01 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
D2 1lnuD02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
E1 1lnuE01 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
E2 1lnuE02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
F1 1lnuF01 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
F2 1lnuF02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
G1 1lnuG01 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
G2 1lnuG02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
H1 1lnuH01 Alpha Beta Roll Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1
H2 1lnuH02 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,C,E,G H-2 class II histocompatibility antigen, A- B alpha chain (1LNU:A,C,E,G)
  • none
B,D,F,H H-2 class II histocompatibility antigen, A beta chain (1LNU:B,D,F,H)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description