Macromolecule Annotations for the Entities in PDB 1LI1

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A2-114 d1li1a1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
A115-229 d1li1a2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
B3-114 d1li1b1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
B115-229 d1li1b2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
C5-114 d1li1c1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
C115-229 d1li1c2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
D2-114 d1li1d1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
D115-229 d1li1d2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
E3-114 d1li1e1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
E115-229 d1li1e2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
F4-114 d1li1f1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]
F115-229 d1li1f2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Noncollagenous (NC1) domain of collagen IV Noncollagenous (NC1) domain of collagen IV Human (Homo sapiens) [TaxId: 9606]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
C PF01413 C4 C-terminal tandem repeated domain in type 4 procollagen Domain Duplicated domain in C-terminus of type 4 collagens. Mutations in alpha-5 collagen IV are associated with X-linked Alport syndrome. PFAM PF01413
A PF01413 C4 C-terminal tandem repeated domain in type 4 procollagen Domain Duplicated domain in C-terminus of type 4 collagens. Mutations in alpha-5 collagen IV are associated with X-linked Alport syndrome. PFAM PF01413
C PF01413 C4 C-terminal tandem repeated domain in type 4 procollagen Domain Duplicated domain in C-terminus of type 4 collagens. Mutations in alpha-5 collagen IV are associated with X-linked Alport syndrome. PFAM PF01413
A PF01413 C4 C-terminal tandem repeated domain in type 4 procollagen Domain Duplicated domain in C-terminus of type 4 collagens. Mutations in alpha-5 collagen IV are associated with X-linked Alport syndrome. PFAM PF01413

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,D,E Collagen alpha 1(IV) (1LI1:A,B,D,E)
  • none
C,F Collagen alpha 2(IV) (1LI1:C,F)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description