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139555
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
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Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1LD8
Co-crystal structure of Human Farnesyltransferase with farnesyldiphosphate and inhibitor compound 49
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
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FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Structure Factor (Text)
Structure Factor (gz)
Biological Assembly (gz) (A+S)
Macromolecule Annotations for the Entities in PDB 1LD8
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A
d1ld8a_
All alpha proteins
alpha-alpha superhelix
Protein prenylyltransferase
Protein prenylyltransferase
Protein farnesyltransferase alpha-subunit
Human (Homo sapiens) [TaxId: 9606]
B
d1ld8b_
All alpha proteins
alpha/alpha toroid
Terpenoid cyclases/Protein prenyltransferases
Protein prenyltransferases
Protein farnesyltransferase, beta-subunit
Human (Homo sapiens) [TaxId: 9606]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A
1ld8A00
Mainly Alpha
Alpha Horseshoe
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
Protein prenylyltransferase
B
1ld8B00
Mainly Alpha
Alpha/alpha barrel
Glycosyltransferase
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
protein farnesyltransferase alpha subunit (1LD8:A)
Prenyltransferase Activity
Protein Farnesyltransferase Activity
Protein Geranylgeranyltransferase Activity
Caax Protein Geranylgeranyltransferase Activity
Rab Geranylgeranyltransferase Activity
Protein Binding
Microtubule Binding
Protein Prenyltransferase Activity
Transferase Activity
Acetylcholine Receptor Regulator Activity
Receptor Tyrosine Kinase Binding
Alpha Tubulin Binding
Transforming Growth Factor Beta Receptor Signaling Pathway
Neuromuscular Junction Development
Protein Prenylation
Protein Farnesylation
Protein Geranylgeranylation
Regulation of Rhodopsin Mediated Signaling Pathway
Neurotransmitter Receptor Metabolic Process
Skeletal Muscle Acetylcholine Gated Channel Clustering
Positive Regulation of Tubulin Deacetylation
Positive Regulation of Deacetylase Activity
Execution Phase of Apoptosis
Regulation of Neurotransmitter Receptor Activity
Cytoplasm
Cytosol
Microtubule Associated Complex
Plasma Membrane
Caax Protein Geranylgeranyltransferase Complex
Protein Farnesyltransferase Complex
B
protein farnesyltransferase beta subunit (1LD8:B)
Catalytic Activity
Farnesyltranstransferase Activity
Prenyltransferase Activity
Protein Farnesyltransferase Activity
Protein Binding
Drug Binding
Zinc Ion Binding
Transferase Activity
Isoprenoid Binding
Peptide Binding
Metal Ion Binding
Positive Regulation of Cell Proliferation
Negative Regulation of Cell Proliferation
Response to Inorganic Substance
Response to Organic Cyclic Compound
Protein Farnesylation
Regulation of Rhodopsin Mediated Signaling Pathway
Response to Cytokine
Wound Healing
Positive Regulation of Cell Cycle
Positive Regulation of Fibroblast Proliferation
Positive Regulation of Nitric Oxide Synthase Biosynthetic Process
Cytosol
Microtubule Associated Complex
Protein Farnesyltransferase Complex
Protein Containing Complex
Protein Modification Annotation
Type
PDB Residue Nr.
Description