Macromolecule Annotations for the Entities in PDB 1L3L

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A170-234 d1l3la1 All alpha proteins DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators) Quorum-sensing transcription factor TraR, C- terminal domain Agrobacterium tumefaciens [TaxId: 358]
A2-169 d1l3la2 Alpha and beta proteins (a+b) Profilin-like Pheromone-binding domain of LuxR-like quorum- sensing transcription factors Pheromone-binding domain of LuxR-like quorum- sensing transcription factors Transcription factor TraR, N-terminal domain Agrobacterium tumefaciens [TaxId: 358]
B170-234 d1l3lb1 All alpha proteins DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators) Quorum-sensing transcription factor TraR, C- terminal domain Agrobacterium tumefaciens [TaxId: 358]
B2-169 d1l3lb2 Alpha and beta proteins (a+b) Profilin-like Pheromone-binding domain of LuxR-like quorum- sensing transcription factors Pheromone-binding domain of LuxR-like quorum- sensing transcription factors Transcription factor TraR, N-terminal domain Agrobacterium tumefaciens [TaxId: 358]
C172-234 d1l3lc1 All alpha proteins DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators) Quorum-sensing transcription factor TraR, C- terminal domain Agrobacterium tumefaciens [TaxId: 358]
C1-162 d1l3lc2 Alpha and beta proteins (a+b) Profilin-like Pheromone-binding domain of LuxR-like quorum- sensing transcription factors Pheromone-binding domain of LuxR-like quorum- sensing transcription factors Transcription factor TraR, N-terminal domain Agrobacterium tumefaciens [TaxId: 358]
D172-234 d1l3ld1 All alpha proteins DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators) Quorum-sensing transcription factor TraR, C- terminal domain Agrobacterium tumefaciens [TaxId: 358]
D1-162 d1l3ld2 Alpha and beta proteins (a+b) Profilin-like Pheromone-binding domain of LuxR-like quorum- sensing transcription factors Pheromone-binding domain of LuxR-like quorum- sensing transcription factors Transcription factor TraR, N-terminal domain Agrobacterium tumefaciens [TaxId: 358]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
E,F,G,H 5'-D(*GP*AP*TP*GP*TP*GP*CP*AP*GP*AP*TP*CP*TP*GP*CP*AP*CP*AP*TP*C)- 3' (1L3L:E,F,G,H)
  • none
  • none
  • none
A,B,C,D Transcriptional activator protein traR (1L3L:A,B,C,D)

Protein Modification Annotation

Type PDB Residue Nr. Description