Macromolecule Annotations for the Entities in PDB 1KXT

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A404-496 d1kxta1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain alpha-Amylases, C-terminal beta-sheet domain Animal alpha-amylase Pig (Sus scrofa) [TaxId: 9823]
A1-403 d1kxta2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Animal alpha-amylase Pig (Sus scrofa) [TaxId: 9823]
B d1kxtb_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Camelid IG heavy chain variable domain, VHh Camel (Camelus dromedarius) [TaxId: 9838]
C404-496 d1kxtc1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain alpha-Amylases, C-terminal beta-sheet domain Animal alpha-amylase Pig (Sus scrofa) [TaxId: 9823]
C1-403 d1kxtc2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Animal alpha-amylase Pig (Sus scrofa) [TaxId: 9823]
D d1kxtd_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Camelid IG heavy chain variable domain, VHh Camel (Camelus dromedarius) [TaxId: 9838]
E404-496 d1kxte1 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain alpha-Amylases, C-terminal beta-sheet domain Animal alpha-amylase Pig (Sus scrofa) [TaxId: 9823]
E1-403 d1kxte2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Animal alpha-amylase Pig (Sus scrofa) [TaxId: 9823]
F d1kxtf_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Camelid IG heavy chain variable domain, VHh Camel (Camelus dromedarius) [TaxId: 9838]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00128 Alpha-amylase Alpha amylase, catalytic domain Domain Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain. PFAM PF00128
A PF02806 Alpha-amylase_C Alpha amylase, C-terminal all-beta domain Domain Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain. PFAM PF02806
B PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686

Protein Modification Annotation

Type PDB Residue Nr. Description