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139717
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
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Sequence
Sequence Similarity
Structure Similarity
Experiment
1KV3
HUMAN TISSUE TRANSGLUTAMINASE IN GDP BOUND FORM
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
Download Files
FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Structure Factor (Text)
Structure Factor (gz)
Biological Assembly 1 (gz) (A)
Biological Assembly 2 (gz) (A)
Biological Assembly 3 (gz) (A)
Macromolecule Annotations for the Entities in PDB 1KV3
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A15-145
d1kv3a1
All beta proteins
Immunoglobulin-like beta-sandwich
E set domains
Transglutaminase N-terminal domain
Transglutaminase N-terminal domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
A469-585
d1kv3a2
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
A586-687
d1kv3a3
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
A146-468
d1kv3a4
Alpha and beta proteins (a+b)
Cysteine proteinases
Cysteine proteinases
Transglutaminase core
Transglutaminase catalytic domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
B15-145
d1kv3b1
All beta proteins
Immunoglobulin-like beta-sandwich
E set domains
Transglutaminase N-terminal domain
Transglutaminase N-terminal domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
B469-585
d1kv3b2
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
B586-687
d1kv3b3
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
B146-468
d1kv3b4
Alpha and beta proteins (a+b)
Cysteine proteinases
Cysteine proteinases
Transglutaminase core
Transglutaminase catalytic domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
C15-145
d1kv3c1
All beta proteins
Immunoglobulin-like beta-sandwich
E set domains
Transglutaminase N-terminal domain
Transglutaminase N-terminal domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
C469-585
d1kv3c2
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
C586-687
d1kv3c3
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
C146-468
d1kv3c4
Alpha and beta proteins (a+b)
Cysteine proteinases
Cysteine proteinases
Transglutaminase core
Transglutaminase catalytic domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
D15-145
d1kv3d1
All beta proteins
Immunoglobulin-like beta-sandwich
E set domains
Transglutaminase N-terminal domain
Transglutaminase N-terminal domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
D469-585
d1kv3d2
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
D586-687
d1kv3d3
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
D146-468
d1kv3d4
Alpha and beta proteins (a+b)
Cysteine proteinases
Cysteine proteinases
Transglutaminase core
Transglutaminase catalytic domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
E15-145
d1kv3e1
All beta proteins
Immunoglobulin-like beta-sandwich
E set domains
Transglutaminase N-terminal domain
Transglutaminase N-terminal domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
E469-585
d1kv3e2
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
E586-687
d1kv3e3
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
E146-468
d1kv3e4
Alpha and beta proteins (a+b)
Cysteine proteinases
Cysteine proteinases
Transglutaminase core
Transglutaminase catalytic domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
F15-145
d1kv3f1
All beta proteins
Immunoglobulin-like beta-sandwich
E set domains
Transglutaminase N-terminal domain
Transglutaminase N-terminal domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
F469-585
d1kv3f2
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
F586-687
d1kv3f3
All beta proteins
Immunoglobulin-like beta-sandwich
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Transglutaminase, two C-terminal domains
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
F146-468
d1kv3f4
Alpha and beta proteins (a+b)
Cysteine proteinases
Cysteine proteinases
Transglutaminase core
Transglutaminase catalytic domain
Human (Homo sapiens), tissue isozyme [TaxId: 9606]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1kv3A01
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
A2
1kv3A02
Alpha Beta
Alpha-Beta Complex
Coagulation Factor XIII; Chain A, domain 2
Coagulation Factor XIII, subunit A, domain 2
A3
1kv3A03
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
A4
1kv3A04
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
B1
1kv3B01
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
B2
1kv3B02
Alpha Beta
Alpha-Beta Complex
Coagulation Factor XIII; Chain A, domain 2
Coagulation Factor XIII, subunit A, domain 2
B3
1kv3B03
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
B4
1kv3B04
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
C1
1kv3C01
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
C2
1kv3C02
Alpha Beta
Alpha-Beta Complex
Coagulation Factor XIII; Chain A, domain 2
Coagulation Factor XIII, subunit A, domain 2
C3
1kv3C03
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
C4
1kv3C04
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
D1
1kv3D01
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
D2
1kv3D02
Alpha Beta
Alpha-Beta Complex
Coagulation Factor XIII; Chain A, domain 2
Coagulation Factor XIII, subunit A, domain 2
D3
1kv3D03
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
D4
1kv3D04
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
E1
1kv3E01
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
E2
1kv3E02
Alpha Beta
Alpha-Beta Complex
Coagulation Factor XIII; Chain A, domain 2
Coagulation Factor XIII, subunit A, domain 2
E3
1kv3E03
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
E4
1kv3E04
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
F1
1kv3F01
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
F2
1kv3F02
Alpha Beta
Alpha-Beta Complex
Coagulation Factor XIII; Chain A, domain 2
Coagulation Factor XIII, subunit A, domain 2
F3
1kv3F03
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
F4
1kv3F04
Mainly Beta
Sandwich
Immunoglobulin-like
Immunoglobulins
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A,B,C,D,E,F
Protein-glutamine gamma-glutamyltransferase (1KV3:A,B,C,D,E,F)
Protein Glutamine Gamma Glutamyltransferase Activity
Protein Binding
GTP Binding
Transferase Activity
Transferase Activity Transferring Acyl Groups
Metal Ion Binding
Blood Vessel Remodeling
Phospholipase C Activating G Protein Coupled Receptor Signaling Pathway
Peptide Cross Linking
Isopeptide Cross Linking Via N6 (l Isoglutamyl) L Lysine
Negative Regulation of Endoplasmic Reticulum Calcium Ion Concentration
Positive Regulation of Apoptotic Process
Positive Regulation of I Kappab Kinase/nf Kappab Signaling
Apoptotic Cell Clearance
Positive Regulation of Cell Adhesion
Positive Regulation of Smooth Muscle Cell Proliferation
Positive Regulation of Inflammatory Response
Protein Homooligomerization
Positive Regulation of Cytosolic Calcium Ion Concentration Involved in Phospholipase C Activating G Protein Coupled Signaling Pathway
Positive Regulation of Mitochondrial Calcium Ion Concentration
Branching Involved in Salivary Gland Morphogenesis
Salivary Gland Cavitation
Cytoplasm
Mitochondrion
Endoplasmic Reticulum
Cytosol
Plasma Membrane
Focal Adhesion
Extracellular Matrix
Intrinsic Component of Plasma Membrane
Extracellular Exosome
Protein Modification Annotation
Type
PDB Residue Nr.
Description