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139555
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
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Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1KOO
THE CRYSTAL STRUCTURE AND MUTATIONAL ANALYSIS OF A NOVEL RNA-BINDING DOMAIN FOUND IN THE HUMAN TAP NUCLEAR MRNA EXPORT FACTOR
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
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FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Structure Factor (Text)
Structure Factor (gz)
Biological Assembly 1 (gz) (A)
Biological Assembly 2 (gz) (A)
Biological Assembly 3 (gz) (A)
Biological Assembly 4 (gz) (A)
Macromolecule Annotations for the Entities in PDB 1KOO
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A201-362
d1kooa1
Alpha and beta proteins (a/b)
Leucine-rich repeat, LRR (right-handed beta- alpha superhelix)
L domain-like
mRNA export factor tap
mRNA export factor tap
Human (Homo sapiens) [TaxId: 9606]
A105-200
d1kooa2
Alpha and beta proteins (a+b)
Ferredoxin-like
RNA-binding domain, RBD
Non-canonical RBD domain
mRNA export factor tap
Human (Homo sapiens) [TaxId: 9606]
B
d1koob_
Alpha and beta proteins (a/b)
Leucine-rich repeat, LRR (right-handed beta- alpha superhelix)
L domain-like
mRNA export factor tap
mRNA export factor tap
Human (Homo sapiens) [TaxId: 9606]
C201-362
d1kooc1
Alpha and beta proteins (a/b)
Leucine-rich repeat, LRR (right-handed beta- alpha superhelix)
L domain-like
mRNA export factor tap
mRNA export factor tap
Human (Homo sapiens) [TaxId: 9606]
C101-200
d1kooc2
Alpha and beta proteins (a+b)
Ferredoxin-like
RNA-binding domain, RBD
Non-canonical RBD domain
mRNA export factor tap
Human (Homo sapiens) [TaxId: 9606]
D
d1kood_
Alpha and beta proteins (a/b)
Leucine-rich repeat, LRR (right-handed beta- alpha superhelix)
L domain-like
mRNA export factor tap
mRNA export factor tap
Human (Homo sapiens) [TaxId: 9606]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1kooA01
Alpha Beta
2-Layer Sandwich
Alpha-Beta Plaits
A2
1kooA02
Alpha Beta
Alpha-Beta Horseshoe
Leucine-rich repeat, LRR (right-handed beta- alpha superhelix)
Ribonuclease Inhibitor
B
1kooB00
Alpha Beta
Alpha-Beta Horseshoe
Leucine-rich repeat, LRR (right-handed beta- alpha superhelix)
Ribonuclease Inhibitor
C1
1kooC01
Alpha Beta
2-Layer Sandwich
Alpha-Beta Plaits
C2
1kooC02
Alpha Beta
Alpha-Beta Horseshoe
Leucine-rich repeat, LRR (right-handed beta- alpha superhelix)
Ribonuclease Inhibitor
D
1kooD00
Alpha Beta
Alpha-Beta Horseshoe
Leucine-rich repeat, LRR (right-handed beta- alpha superhelix)
Ribonuclease Inhibitor
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A,B,C,D
TIP ASSOCIATING PROTEIN (1KOO:A,B,C,D)
Nucleic Acid Binding
RNA Binding
MRNA Export From Nucleus
Nucleus
Cytoplasm
Protein Modification Annotation
Type
PDB Residue Nr.
Description