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139555
Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
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Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
1KMH
Crystal Structure of spinach chloroplast F1-ATPase complexed with tentoxin
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
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FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
PDBML/XML File
PDBML/XML File (gz)
Biological Assembly 1 (gz) (A+S)
Biological Assembly 2 (gz) (S)
Biological Assembly 3 (gz) (S)
Macromolecule Annotations for the Entities in PDB 1KMH
Domain Annotation: SCOP Classification
SCOP Database (version: 1.75) Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
A373-501
d1kmha1
All alpha proteins
Left-handed superhelix
C-terminal domain of alpha and beta subunits of F1 ATP synthase
C-terminal domain of alpha and beta subunits of F1 ATP synthase
F1 ATP synthase alpha subunit, domain 3
Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
A25-96
d1kmha2
All beta proteins
Domain of alpha and beta subunits of F1 ATP synthase- like
N-terminal domain of alpha and beta subunits of F1 ATP synthase
N-terminal domain of alpha and beta subunits of F1 ATP synthase
F1 ATP synthase alpha subunit, domain 1
Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
A97-372
d1kmha3
Alpha and beta proteins (a/b)
P-loop containing nucleoside triphosphate hydrolases
P-loop containing nucleoside triphosphate hydrolases
RecA protein-like (ATPase-domain)
Central domain of alpha subunit of F1 ATP synthase
Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
B378-485
d1kmhb1
All alpha proteins
Left-handed superhelix
C-terminal domain of alpha and beta subunits of F1 ATP synthase
C-terminal domain of alpha and beta subunits of F1 ATP synthase
F1 ATP synthase beta subunit, domain 3
Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
B19-97
d1kmhb2
All beta proteins
Domain of alpha and beta subunits of F1 ATP synthase- like
N-terminal domain of alpha and beta subunits of F1 ATP synthase
N-terminal domain of alpha and beta subunits of F1 ATP synthase
F1 ATP synthase beta subunit, domain 1
Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
B98-377
d1kmhb3
Alpha and beta proteins (a/b)
P-loop containing nucleoside triphosphate hydrolases
P-loop containing nucleoside triphosphate hydrolases
RecA protein-like (ATPase-domain)
Central domain of beta subunit of F1 ATP synthase
Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
Domain Annotation: CATH
CATH Database (version 4.0.0) Homepage
Chains
Domain
Class
Architecture
Topology
Homology
A1
1kmhA01
Mainly Beta
Beta Barrel
Elongation Factor Tu (Ef-tu); domain 3
A2
1kmhA02
Alpha Beta
3-Layer(aba) Sandwich
Rossmann fold
P-loop containing nucleotide triphosphate hydrolases
A3
1kmhA03
Mainly Alpha
Up-down Bundle
Lysin
B1
1kmhB01
Mainly Beta
Beta Barrel
Thrombin, subunit H
B2
1kmhB02
Alpha Beta
3-Layer(aba) Sandwich
Rossmann fold
P-loop containing nucleotide triphosphate hydrolases
B3
1kmhB03
Mainly Alpha
Orthogonal Bundle
Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Protein Family Annotation
Pfam Database Homepage
Chains
Pfam Accession
Pfam Identifier
Pfam Description
Type
Source
Gene Product Annotation
Gene Ontology Consortium Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
ATPase alpha subunit (1KMH:A)
Nucleotide Binding
ATP Binding
Hydrolase Activity
Adenyl Ribonucleotide Binding
Proton Transporting ATP Synthase Activity Rotational Mechanism
ATP Biosynthetic Process
Ion Transport
ATP Synthesis Coupled Proton Transport
ATP Metabolic Process
ATP Hydrolysis Coupled Cation Transmembrane Transport
Chloroplast
Chloroplast Thylakoid Membrane
Plastid
Thylakoid
Membrane
Proton Transporting ATP Synthase Complex Catalytic Core F(1)
B
ATPase beta subunit (1KMH:B)
Nucleotide Binding
ATP Binding
Hydrolase Activity
Proton Transporting ATP Synthase Activity Rotational Mechanism
ATP Biosynthetic Process
Ion Transport
ATP Synthesis Coupled Proton Transport
ATP Metabolic Process
ATP Hydrolysis Coupled Cation Transmembrane Transport
Chloroplast
Chloroplast Thylakoid Membrane
Plastid
Thylakoid
Membrane
Proton Transporting ATP Synthase Complex Catalytic Core F(1)
Protein Modification Annotation
Type
PDB Residue Nr.
Description