Macromolecule Annotations for the Entities in PDB 1KEN

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1kena_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin Influenza A virus, different strains [TaxId: 11320]
B d1kenb_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza A virus, different strains [TaxId: 11320]
C d1kenc_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin Influenza A virus, different strains [TaxId: 11320]
D d1kend_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza A virus, different strains [TaxId: 11320]
E d1kene_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin Influenza A virus, different strains [TaxId: 11320]
F d1kenf_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza A virus, different strains [TaxId: 11320]
H1-120 d1kenh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
H121-221 d1kenh2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin heavy chain gamma constant domain 1, CH1- gamma Mouse (Mus musculus) [TaxId: 10090]
L1-108 d1kenl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL- kappa Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
L109-213 d1kenl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin light chain kappa constant domain, CL- kappa Mouse (Mus musculus) [TaxId: 10090]
T1-120 d1kent1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
T121-219 d1kent2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin heavy chain gamma constant domain 1, CH1- gamma Mouse (Mus musculus) [TaxId: 10090]
U1-108 d1kenu1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL- kappa Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
U109-213 d1kenu2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin light chain kappa constant domain, CL- kappa Mouse (Mus musculus) [TaxId: 10090]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00509 Hemagglutinin Haemagglutinin Family
L PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
H PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
H PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
L PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
B PF00509 Hemagglutinin Haemagglutinin Family

Protein Modification Annotation

Type PDB Residue Nr. Description