Macromolecule Annotations for the Entities in PDB 1KEN

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1kena_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin Influenza A virus, different strains [TaxId: 11320]
B d1kenb_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza A virus, different strains [TaxId: 11320]
C d1kenc_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin Influenza A virus, different strains [TaxId: 11320]
D d1kend_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza A virus, different strains [TaxId: 11320]
E d1kene_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin Influenza A virus, different strains [TaxId: 11320]
F d1kenf_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza A virus, different strains [TaxId: 11320]
H1-120 d1kenh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
H121-221 d1kenh2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin heavy chain gamma constant domain 1, CH1- gamma Mouse (Mus musculus) [TaxId: 10090]
L1-108 d1kenl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL- kappa Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
L109-213 d1kenl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin light chain kappa constant domain, CL- kappa Mouse (Mus musculus) [TaxId: 10090]
T1-120 d1kent1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
T121-219 d1kent2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin heavy chain gamma constant domain 1, CH1- gamma Mouse (Mus musculus) [TaxId: 10090]
U1-108 d1kenu1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL- kappa Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
U109-213 d1kenu2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin light chain kappa constant domain, CL- kappa Mouse (Mus musculus) [TaxId: 10090]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,C,E hemagglutinin HA1 (1KEN:A,C,E)
  • none
  • none
  • none
B,D,F hemagglutinin HA2 (1KEN:B,D,F)
  • none
  • none
  • none
L,U influenza virus infectivity neutralizing antibody (light chain) (1KEN:L,U)
H,T influenza virus infectivity neutralizing antibody (heavy chain) (1KEN:H,T)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description