Macromolecule Annotations for the Entities in PDB 1K28

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF06715 Gp5_C Gp5 C-terminal repeat (3 copies) Repeat
D PF09096 Phage-tail_2 Baseplate structural protein, domain 2 Domain Members of this family adopt a beta barrel structure with a Greek key topology, which is topologically similar to the FMN-binding split barrel. They are structural component of the viral baseplate, predominantly found in the structural protein gp27 [1]. PFAM PF09096
A PF06715 Gp5_C Gp5 C-terminal repeat (3 copies) Repeat
A PF00959 Phage_lysozyme Phage lysozyme Domain This family includes lambda phage lysozyme and E. coli endolysin. PFAM PF00959
A PF06715 Gp5_C Gp5 C-terminal repeat (3 copies) Repeat
A PF06714 Gp5_OB Gp5 N-terminal OB domain Domain This domain is found at the N terminus of the Gp5 baseplate protein of bacteriophage T4. This domain binds to the Gp27 protein [1]. This domain has the common OB fold [1]. PFAM PF06714
D PF09097 Phage-tail_1 Baseplate structural protein, domain 1 Domain Members of this family adopt a beta barrel structure with a Greek key topology, which is topologically similar to the FMN-binding split barrel. They are structural component of the viral baseplate, predominantly found in the structural protein gp27 [1]. PFAM PF09097