Macromolecule Annotations for the Entities in PDB 1JV2

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A439-598 d1jv2a1 All beta proteins Immunoglobulin-like beta-sandwich Integrin domains Integrin domains Thigh, calf-1 and calf-2 domains of integrin alpha Human (Homo sapiens) [TaxId: 9606]
A599-737 d1jv2a2 All beta proteins Immunoglobulin-like beta-sandwich Integrin domains Integrin domains Thigh, calf-1 and calf-2 domains of integrin alpha Human (Homo sapiens) [TaxId: 9606]
A738-956 d1jv2a3 All beta proteins Immunoglobulin-like beta-sandwich Integrin domains Integrin domains Thigh, calf-1 and calf-2 domains of integrin alpha Human (Homo sapiens) [TaxId: 9606]
A1-438 d1jv2a4 All beta proteins 7-bladed beta-propeller Integrin alpha N-terminal domain Integrin alpha N-terminal domain Integrin alpha N-terminal domain Human (Homo sapiens), isoform V [TaxId: 9606]
B55-106,B355-434 d1jv2b1 All beta proteins Immunoglobulin-like beta-sandwich Integrin domains Integrin domains Hybrid domain of integrin beta Human (Homo sapiens) [TaxId: 9606]
B107-354 d1jv2b2 Alpha and beta proteins (a/b) vWA-like vWA-like Integrin A (or I) domain Integrin beta A domain Human (Homo sapiens) [TaxId: 9606]
B606-690 d1jv2b3 Alpha and beta proteins (a+b) Integrin beta tail domain Integrin beta tail domain Integrin beta tail domain Integrin beta tail domain Human (Homo sapiens) [TaxId: 9606]
B532-562 d1jv2b4 Small proteins Knottins (small inhibitors, toxins, lectins) EGF/Laminin Integrin beta EGF-like domains Integrin beta EGF-like domains Human (Homo sapiens) [TaxId: 9606]
B563-605 d1jv2b5 Small proteins Knottins (small inhibitors, toxins, lectins) EGF/Laminin Integrin beta EGF-like domains Integrin beta EGF-like domains Human (Homo sapiens) [TaxId: 9606]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF01839 FG-GAP FG-GAP repeat Repeat
A PF08441 Integrin_alpha2 Integrin alpha Family
A PF01839 FG-GAP FG-GAP repeat Repeat
B PF00362 Integrin_beta Integrin, beta chain Family
A PF01839 FG-GAP FG-GAP repeat Repeat
B PF07965 Integrin_B_tail Integrin beta tail domain Domain This is the beta tail domain of the Integrin protein. Integrins are receptors which are involved in cell-cell and cell-extracellular matrix interactions. PFAM PF07965
B PF07974 EGF_2 EGF-like domain Domain This family contains EGF domains found in a variety of extracellular proteins. PFAM PF07974

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A INTEGRIN, ALPHA V (1JV2:A)
B PLATELET MEMBRANE GLYCOPROTEIN IIIA BETA SUBUNIT (1JV2:B)
SUGAR (2-MER) (1JV2:)
  • none
  • none
  • none
SUGAR (2-MER) (1JV2:)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description