Macromolecule Annotations for the Entities in PDB 1JRO

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A85-166 d1jroa1 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like Xanthine dehydrogenase chain A, domain 2 Rhodobacter capsulatus [TaxId: 1061]
A1-84 d1jroa2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Xanthine dehydrogenase chain A, N-terminal domain Rhodobacter capsulatus [TaxId: 1061]
A346-462 d1jroa3 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain- like CO dehydrogenase flavoprotein C-terminal domain- like Xanthine dehydrogenase chain A, domain 4 Rhodobacter capsulatus [TaxId: 1061]
A179-345 d1jroa4 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain- like FAD-binding/transporter-associated domain- like CO dehydrogenase flavoprotein N-terminal domain- like Xanthine dehydrogenase chain A, domain 3 Rhodobacter capsulatus [TaxId: 1061]
B2-123 d1jrob1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain- like CO dehydrogenase molybdoprotein N-domain- like Xanthine dehydrogenase chain B, N-terminal domain Rhodobacter capsulatus [TaxId: 1061]
B124-777 d1jrob2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Xanthine dehydrogenase chain B, C-terminal domain Rhodobacter capsulatus [TaxId: 1061]
C85-166 d1jroc1 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like Xanthine dehydrogenase chain A, domain 2 Rhodobacter capsulatus [TaxId: 1061]
C1-84 d1jroc2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Xanthine dehydrogenase chain A, N-terminal domain Rhodobacter capsulatus [TaxId: 1061]
C346-462 d1jroc3 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain- like CO dehydrogenase flavoprotein C-terminal domain- like Xanthine dehydrogenase chain A, domain 4 Rhodobacter capsulatus [TaxId: 1061]
C179-345 d1jroc4 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain- like FAD-binding/transporter-associated domain- like CO dehydrogenase flavoprotein N-terminal domain- like Xanthine dehydrogenase chain A, domain 3 Rhodobacter capsulatus [TaxId: 1061]
D2-123 d1jrod1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain- like CO dehydrogenase molybdoprotein N-domain- like Xanthine dehydrogenase chain B, N-terminal domain Rhodobacter capsulatus [TaxId: 1061]
D124-777 d1jrod2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Xanthine dehydrogenase chain B, C-terminal domain Rhodobacter capsulatus [TaxId: 1061]
E85-166 d1jroe1 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like Xanthine dehydrogenase chain A, domain 2 Rhodobacter capsulatus [TaxId: 1061]
E1-84 d1jroe2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Xanthine dehydrogenase chain A, N-terminal domain Rhodobacter capsulatus [TaxId: 1061]
E346-462 d1jroe3 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain- like CO dehydrogenase flavoprotein C-terminal domain- like Xanthine dehydrogenase chain A, domain 4 Rhodobacter capsulatus [TaxId: 1061]
E179-345 d1jroe4 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain- like FAD-binding/transporter-associated domain- like CO dehydrogenase flavoprotein N-terminal domain- like Xanthine dehydrogenase chain A, domain 3 Rhodobacter capsulatus [TaxId: 1061]
F2-123 d1jrof1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain- like CO dehydrogenase molybdoprotein N-domain- like Xanthine dehydrogenase chain B, N-terminal domain Rhodobacter capsulatus [TaxId: 1061]
F124-777 d1jrof2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Xanthine dehydrogenase chain B, C-terminal domain Rhodobacter capsulatus [TaxId: 1061]
G85-166 d1jrog1 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like Xanthine dehydrogenase chain A, domain 2 Rhodobacter capsulatus [TaxId: 1061]
G1-84 d1jrog2 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like 2Fe-2S ferredoxin domains from multidomain proteins Xanthine dehydrogenase chain A, N-terminal domain Rhodobacter capsulatus [TaxId: 1061]
G346-462 d1jrog3 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain- like CO dehydrogenase flavoprotein C-terminal domain- like Xanthine dehydrogenase chain A, domain 4 Rhodobacter capsulatus [TaxId: 1061]
G179-345 d1jrog4 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain- like FAD-binding/transporter-associated domain- like CO dehydrogenase flavoprotein N-terminal domain- like Xanthine dehydrogenase chain A, domain 3 Rhodobacter capsulatus [TaxId: 1061]
H2-123 d1jroh1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain- like CO dehydrogenase molybdoprotein N-domain- like Xanthine dehydrogenase chain B, N-terminal domain Rhodobacter capsulatus [TaxId: 1061]
H124-777 d1jroh2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Xanthine dehydrogenase chain B, C-terminal domain Rhodobacter capsulatus [TaxId: 1061]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1jroA01 Alpha Beta Roll Ubiquitin-like (UB roll)
A2 1jroA02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1
A3 1jroA03 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2
A4 1jroA04 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3
A5 1jroA05 Alpha Beta 2-Layer Sandwich Enolase-like; domain 1
B1 1jroB01 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3
B2 1jroB02 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
B3 1jroB03 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
B4 1jroB04 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
B5 1jroB05 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
C1 1jroC01 Alpha Beta Roll Ubiquitin-like (UB roll)
C2 1jroC02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1
C3 1jroC03 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2
C4 1jroC04 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3
C5 1jroC05 Alpha Beta 2-Layer Sandwich Enolase-like; domain 1
D1 1jroD01 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3
D2 1jroD02 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
D3 1jroD03 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
D4 1jroD04 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
D5 1jroD05 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
E1 1jroE01 Alpha Beta Roll Ubiquitin-like (UB roll)
E2 1jroE02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1
E3 1jroE03 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2
E4 1jroE04 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3
E5 1jroE05 Alpha Beta 2-Layer Sandwich Enolase-like; domain 1
F1 1jroF01 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3
F2 1jroF02 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
F3 1jroF03 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
F4 1jroF04 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
F5 1jroF05 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
G1 1jroG01 Alpha Beta Roll Ubiquitin-like (UB roll)
G2 1jroG02 Mainly Alpha Orthogonal Bundle DNA polymerase; domain 1
G3 1jroG03 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2
G4 1jroG04 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3
G5 1jroG05 Alpha Beta 2-Layer Sandwich Enolase-like; domain 1
H1 1jroH01 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3
H2 1jroH02 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
H3 1jroH03 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
H4 1jroH04 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4
H5 1jroH05 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase; domain 4 Aldehyde Oxidoreductase; domain 4

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Protein Modification Annotation

Type PDB Residue Nr. Description