Macromolecule Annotations for the Entities in PDB 1JR3

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A243-368 d1jr3a1 All alpha proteins post-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like DNA polymerase III clamp loader subunits, C- terminal domain gamma subunit Escherichia coli [TaxId: 562]
A3-242 d1jr3a2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain gamma subunit of DNA polymerase III, N-domain Escherichia coli [TaxId: 562]
B243-368 d1jr3b1 All alpha proteins post-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like DNA polymerase III clamp loader subunits, C- terminal domain gamma subunit Escherichia coli [TaxId: 562]
B4-242 d1jr3b2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain gamma subunit of DNA polymerase III, N-domain Escherichia coli [TaxId: 562]
C243-368 d1jr3c1 All alpha proteins post-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like DNA polymerase III clamp loader subunits, C- terminal domain gamma subunit Escherichia coli [TaxId: 562]
C3-242 d1jr3c2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain gamma subunit of DNA polymerase III, N-domain Escherichia coli [TaxId: 562]
D212-338 d1jr3d1 All alpha proteins post-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like DNA polymerase III clamp loader subunits, C- terminal domain delta subunit Escherichia coli [TaxId: 562]
D1-211 d1jr3d2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain delta subunit of DNA polymerase III, N-domain Escherichia coli [TaxId: 562]
E208-334 d1jr3e1 All alpha proteins post-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like DNA polymerase III clamp loader subunits, C- terminal domain delta prime subunit Escherichia coli [TaxId: 562]
E1-207 d1jr3e2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain delta prime subunit of DNA polymerase III, N- domain Escherichia coli [TaxId: 562]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF12169 DNA_pol3_gamma3 DNA polymerase III subunits gamma and tau domain III Family
D PF06144 DNA_pol3_delta DNA polymerase III, delta subunit Family
E PF13177 DNA_pol3_delta2 DNA polymerase III, delta subunit Domain DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalysed reaction [1]. The delta subunit is also known as HolA. PFAM PF13177
A PF13177 DNA_pol3_delta2 DNA polymerase III, delta subunit Domain DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalysed reaction [1]. The delta subunit is also known as HolA. PFAM PF13177
E PF09115 DNApol3-delta_C DNA polymerase III, delta subunit, C terminal Domain Members of this family, which are predominantly found in prokaryotic DNA polymerase III, assume an alpha helical structure, with a core of five alpha helices, and an additional small helix. They are essential for the formation of the polymerase clamp loader [1]. PFAM PF09115
D PF14840 DNA_pol3_delt_C Processivity clamp loader gamma complex DNA pol III C-term Family

Protein Modification Annotation

Type PDB Residue Nr. Description