Macromolecule Annotations for the Entities in PDB 1JQJ

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-122 d1jqja1 Alpha and beta proteins (a+b) DNA clamp DNA clamp DNA polymerase III, beta subunit DNA polymerase III, beta subunit Escherichia coli [TaxId: 562]
A123-244 d1jqja2 Alpha and beta proteins (a+b) DNA clamp DNA clamp DNA polymerase III, beta subunit DNA polymerase III, beta subunit Escherichia coli [TaxId: 562]
A245-366 d1jqja3 Alpha and beta proteins (a+b) DNA clamp DNA clamp DNA polymerase III, beta subunit DNA polymerase III, beta subunit Escherichia coli [TaxId: 562]
B1-122 d1jqjb1 Alpha and beta proteins (a+b) DNA clamp DNA clamp DNA polymerase III, beta subunit DNA polymerase III, beta subunit Escherichia coli [TaxId: 562]
B123-244 d1jqjb2 Alpha and beta proteins (a+b) DNA clamp DNA clamp DNA polymerase III, beta subunit DNA polymerase III, beta subunit Escherichia coli [TaxId: 562]
B245-366 d1jqjb3 Alpha and beta proteins (a+b) DNA clamp DNA clamp DNA polymerase III, beta subunit DNA polymerase III, beta subunit Escherichia coli [TaxId: 562]
C212-333 d1jqjc1 All alpha proteins post-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like DNA polymerase III clamp loader subunits, C- terminal domain delta subunit Escherichia coli [TaxId: 562]
C1-211 d1jqjc2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain delta subunit of DNA polymerase III, N-domain Escherichia coli [TaxId: 562]
D213-333 d1jqjd1 All alpha proteins post-AAA+ oligomerization domain-like post-AAA+ oligomerization domain-like DNA polymerase III clamp loader subunits, C- terminal domain delta subunit Escherichia coli [TaxId: 562]
D1-209 d1jqjd2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain delta subunit of DNA polymerase III, N-domain Escherichia coli [TaxId: 562]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00712 DNA_pol3_beta DNA polymerase III beta subunit, N-terminal domain Domain A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold. PFAM PF00712
C PF06144 DNA_pol3_delta DNA polymerase III, delta subunit Family
A PF02767 DNA_pol3_beta_2 DNA polymerase III beta subunit, central domain Domain A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold. PFAM PF02767
C PF14840 DNA_pol3_delt_C Processivity clamp loader gamma complex DNA pol III C-term Family
A PF02768 DNA_pol3_beta_3 DNA polymerase III beta subunit, C-terminal domain Domain A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold. PFAM PF02768

Protein Modification Annotation

Type PDB Residue Nr. Description