Macromolecule Annotations for the Entities in PDB 1JMA

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF00020 TNFR_c6 TNFR/NGFR cysteine-rich region Domain PFAM PF00020
A PF01537 Herpes_glycop_D Herpesvirus glycoprotein D/GG/GX domain Domain This domain is found in several Herpes viruses glycoproteins. This is a family includes glycoprotein-D (gD or gIV) which is common to herpes simplex virus types 1 and 2, as well as equine herpes, bovine herpes and Marek's disease virus. Glycoprotein-D has been found on the viral envelope and the plasma membrane of infected cells. and gD immunisation can produce an immune response to bovine herpes virus (BHV-1). This response is stronger than that of the other major glycoproteins gB (gI) and gC (gIII) in BHV-1. Glycoprotein G (gG)is one of the seven external glycoproteins of HSV1 and HSV2. This family also contains the glycoprotein GX, (gX), initially identified in Pseudorabies virus. PFAM PF01537

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
B HERPESVIRUS ENTRY MEDIATOR (1JMA:B)
  • none
  • none
  • none
A GLYCOPROTEIN D (1JMA:A)
  • none
  • none
SUGAR (2-MER) (1JMA:)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description