Macromolecule Annotations for the Entities in PDB 1JEY

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF03731 Ku_N Ku70/Ku80 N-terminal alpha/beta domain Domain The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal alpha/beta domain. This domain only makes a small contribution to the dimer interface. The domain comprises a six stranded beta sheet of the Rossman fold [1]. PFAM PF03731
B PF03731 Ku_N Ku70/Ku80 N-terminal alpha/beta domain Domain The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal alpha/beta domain. This domain only makes a small contribution to the dimer interface. The domain comprises a six stranded beta sheet of the Rossman fold [1]. PFAM PF03731
B PF02735 Ku Ku70/Ku80 beta-barrel domain Domain The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the central DNA-binding beta-barrel domain. This domain is found in both the Ku70 Swiss:P12956 and Ku80 Swiss:P13010 proteins that form a DNA binding heterodimer [1]. PFAM PF02735
A PF03730 Ku_C Ku70/Ku80 C-terminal arm Family
B PF03730 Ku_C Ku70/Ku80 C-terminal arm Family
A PF02735 Ku Ku70/Ku80 beta-barrel domain Domain The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the central DNA-binding beta-barrel domain. This domain is found in both the Ku70 Swiss:P12956 and Ku80 Swiss:P13010 proteins that form a DNA binding heterodimer [1]. PFAM PF02735

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
C DNA (5'-D(*GP*TP*TP*TP*TP*TP*AP*GP*TP*TP*TP*AP*TP*TP*GP*GP*GP*CP*GP*CP*G)- 3') (1JEY:C)
  • none
  • none
  • none
D DNA (34-MER) (1JEY:D)
  • none
  • none
  • none
A Ku70 (1JEY:A)
B Ku80 (1JEY:B)

Protein Modification Annotation

Type PDB Residue Nr. Description