Macromolecule Annotations for the Entities in PDB 1JEW

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
R PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
2 PF00073 Rhv picornavirus capsid protein Domain CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur. PFAM PF00073
3 PF00073 Rhv picornavirus capsid protein Domain CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur. PFAM PF00073
4 PF02226 Pico_P1A Picornavirus coat protein (VP4) Family
1 PF00073 Rhv picornavirus capsid protein Domain CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur. PFAM PF00073

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
R COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR (1JEW:R)
  • none
  • none
  • none
1 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP1 (1JEW:1)
  • none
  • none
  • none
2 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2 (1JEW:2)
  • none
  • none
  • none
3 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3 (1JEW:3)
  • none
  • none
  • none
4 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP4 (1JEW:4)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description