Macromolecule Annotations for the Entities in PDB 1IYW

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A797-862 d1iywa1 All alpha proteins Long alpha-hairpin tRNA-binding arm Valyl-tRNA synthetase (ValRS) C-terminal domain Valyl-tRNA synthetase (ValRS) C-terminal domain Thermus thermophilus [TaxId: 274]
A579-796 d1iywa2 All alpha proteins Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
A190-342 d1iywa3 All beta proteins ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
A1-189,A343-578 d1iywa4 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
B797-862 d1iywb1 All alpha proteins Long alpha-hairpin tRNA-binding arm Valyl-tRNA synthetase (ValRS) C-terminal domain Valyl-tRNA synthetase (ValRS) C-terminal domain Thermus thermophilus [TaxId: 274]
B579-796 d1iywb2 All alpha proteins Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
B190-342 d1iywb3 All beta proteins ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain ValRS/IleRS/LeuRS editing domain Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]
B1-189,B343-578 d1iywb4 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Valyl-tRNA synthetase (ValRS) Thermus thermophilus [TaxId: 274]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF10458 Val_tRNA-synt_C Valyl tRNA synthetase tRNA binding arm Domain This domain is found at the C-terminus of Valyl tRNA synthetases. PFAM PF10458
A PF08264 Anticodon_1 Anticodon-binding domain of tRNA Domain This domain is found mainly hydrophobic tRNA synthetases. The domain binds to the anticodon of the tRNA. PFAM PF08264
A PF00133 tRNA-synt_1 tRNA synthetases class I (I, L, M and V) Family

Protein Modification Annotation

Type PDB Residue Nr. Description