Macromolecule Annotations for the Entities in PDB 1IWA

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A150-478 d1iwaa1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
A6-149 d1iwaa2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
B d1iwab_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
C150-478 d1iwac1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
C6-149 d1iwac2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
D d1iwad_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
E150-478 d1iwae1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
E6-149 d1iwae2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
F d1iwaf_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
G150-478 d1iwag1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
G6-149 d1iwag2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
H d1iwah_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
I150-478 d1iwai1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
I6-149 d1iwai2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
J d1iwaj_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
K150-478 d1iwak1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
K6-149 d1iwak2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
L d1iwal_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
M150-478 d1iwam1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
M6-149 d1iwam2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
N d1iwan_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
O150-478 d1iwao1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
O6-149 d1iwao2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]
P d1iwap_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase Galdieria partita [TaxId: 83374]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 1iwaA01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
A2 1iwaA02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
B 1iwaB00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
C1 1iwaC01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
C2 1iwaC02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
D 1iwaD00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
E1 1iwaE01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
E2 1iwaE02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
F 1iwaF00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
G1 1iwaG01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
G2 1iwaG02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
H 1iwaH00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
I1 1iwaI01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
I2 1iwaI02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
J 1iwaJ00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
K1 1iwaK01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
K2 1iwaK02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
L 1iwaL00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
M1 1iwaM01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
M2 1iwaM02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
N 1iwaN00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit
O1 1iwaO01 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
O2 1iwaO02 Alpha Beta Alpha-Beta Barrel TIM Barrel Rubisco
P 1iwaP00 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase RuBisCO, small subunit

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF00101 RuBisCO_small Ribulose bisphosphate carboxylase, small chain Domain PFAM PF00101
A PF02788 RuBisCO_large_N Ribulose bisphosphate carboxylase large chain, N-terminal domain Domain The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold. PFAM PF02788
A PF00016 RuBisCO_large Ribulose bisphosphate carboxylase large chain, catalytic domain Domain The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold. PFAM PF00016

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,C,E,G,I,K,M,O ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (1IWA:A,C,E,G,I,K,M,O)
B,D,F,H,J,L,N,P ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (1IWA:B,D,F,H,J,L,N,P)
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description